RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 HNRNPFP52597 415 aaKnown RBP9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CDKL1Q00532 357 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 LIPEQ05469 1076 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CHRNB3Q05901 458 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF33BQ06732 778 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CDC20Q12834 499 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 PWP1Q13610 501 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 OR4D1Q15615 310 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 RBBP7Q16576 425 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 PPP1R3AQ16821 1122 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CYP51A1Q16850 503 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 RFX4Q33E94 735 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 VPS26BQ4G0F5 336 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 XKR7Q5GH72 579 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CCNYL2Q5T2Q4 361 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CLEC6AQ6EIG7 209 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF549Q6P9A3 640 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 PAQR3Q6TCH7 311 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CYP2R1Q6VVX0 501 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 NEK10Q6ZWH5 1172 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 SLC22A15Q8IZD6 547 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 SVOPLQ8N434 492 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 RAB42Q8N4Z0 105 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 GALNT6Q8NCL4 622 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 OR5K2Q8NHB8 316 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 HMGCLL1Q8TB92 370 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 TMEM125Q96AQ2 219 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CIB1Q99828 191 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 ADI1Q9BV57 179 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 RAB11FIP5Q9BXF6 653 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 SLC7A5P2Q9GIP4 190 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 SEMA6AQ9H2E6 1030 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 GORASP2Q9H8Y8 452 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 TBCCD1Q9NVR7 557 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 ACTR10Q9NZ32 417 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 OR6C2Q9NZP2 312 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CD274Q9NZQ7 290 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 MARCH4Q9P2E8 410 aaPredicted RBP9.9□□□□□ -0.82
COL5A1-202ENST00000371820 TUBD1Q9UJT1 453 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 PACSIN3Q9UKS6 424 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 AURKCQ9UQB9 309 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 SLC9B1P1A6NJY1 282 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF839A8K0R7 811 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 BTN3A3O00478 584 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ARPC2O15144 300 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 OR1I1O60431 355 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 TIPRLO75663 272 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 SCRG1O75711 98 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 SCELO95171 688 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 KCNH1O95259 989 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 FKBP9O95302 570 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 IL6P05231 212 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 HBQ1P09105 142 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 LINC00032P0C843 101 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 CBSLP0DN79 551 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 RAP2AP10114 183 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF28P17035 718 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 JUNBP17275 347 aaPredicted RBP9.89□□□□□ -0.83
COL5A1-202ENST00000371820 CHRM3P20309 590 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 CBSP35520 551 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 GSK3BP49841 420 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 CDH13P55290 713 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 TLE1Q04724 770 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 HSPA14Q0VDF9 509 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 KCNAB2Q13303 367 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 DNASE1L3Q13609 305 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 KCNAB1Q14722 419 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 GLYATQ6IB77 296 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 HMBOX1Q6NT76 420 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 UNC5DQ6UXZ4 953 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 FRA10AC1Q70Z53 315 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 AMIGO2Q86SJ2 522 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 SPPL2CQ8IUH8 684 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 DCUN1D3Q8IWE4 304 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ADGRG5Q8IZF4 528 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 TCAIMQ8N3R3 496 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF555Q8NEP9 628 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 OR5AR1Q8NGP9 310 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 METTL6Q8TCB7 284 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 SLC22A18Q96BI1 424 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF501Q96CX3 271 aaPredicted RBP9.89□□□□□ -0.83
COL5A1-202ENST00000371820 MOCOSQ96EN8 888 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 C3orf30Q96M34 536 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 FOPNLQ96NB1 174 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 LRFN5Q96NI6 719 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 SLC29A1Q99808 456 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 BCL7BQ9BQE9 202 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 GPR87Q9BY21 358 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 PALMDQ9NP74 551 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 LHX9Q9NQ69 397 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 CMTM6Q9NX76 183 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ASIC5Q9NY37 505 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF639Q9UID6 485 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 SERTAD3Q9UJW9 196 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 PCTPQ9UKL6 214 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 FAF1Q9UNN5 650 aaPredicted RBP9.89□□□□□ -0.83
COL5A1-202ENST00000371820 ICKQ9UPZ9 632 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 TDRKHQ9Y2W6 561 aaKnown RBP9.89□□□□□ -0.83
COL5A1-202ENST00000371820 PCDHGA6Q9Y5G7 932 aa9.89□□□□□ -0.83
COL5A1-202ENST00000371820 AP1M2Q9Y6Q5 423 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms