RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 C21orf33P30042 268 aaPredicted RBP7.39□□□□□ -1.23
CCL28-201ENST00000361115 UQCRC1P31930 480 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 NNMTP40261 264 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 SLC26A3P40879 764 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 CRISP3P54108 245 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 SRSF1Q07955 248 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCL28-201ENST00000361115 ATP6AP1LQ52LC2 224 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 CARD16Q5EG05 197 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 SPANXN2Q5MJ10 180 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 C6orf132Q5T0Z8 1188 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 PGBD5Q8N414 524 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 DPP10Q8N608 796 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 ZNF548Q8NEK5 533 aaPredicted RBP7.39□□□□□ -1.23
CCL28-201ENST00000361115 ZMIZ2Q8NF64 920 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 SLC2A14Q8TDB8 520 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 RLN3Q8WXF3 142 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 FAM162AQ96A26 154 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 RAB7BQ96AH8 199 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 TSPAN17Q96FV3 270 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 GORASP2Q9H8Y8 452 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 C12orf10Q9HB07 376 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 COQ3Q9NZJ6 369 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 MARCH4Q9P2E8 410 aaPredicted RBP7.39□□□□□ -1.23
CCL28-201ENST00000361115 IL17BQ9UHF5 180 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 ZNF225Q9UK10 706 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 ERVW-1Q9UQF0 538 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 CRYL1Q9Y2S2 319 aa7.39□□□□□ -1.23
CCL28-201ENST00000361115 COL27A1Q8IZC6 1860 aaPredicted RBP7.39□□□□□ -1.23
CCL28-201ENST00000361115 PRRT4C9JH25 899 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 LOC110117498-PIK3R3F6TDL0 507 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SHOXO15266 292 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CRCPO75575 148 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 MLYCDO95822 493 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CA5AP35218 305 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ADRA1AP35348 466 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 BLVRAP53004 296 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CXCR4P61073 352 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 POU6F2P78424 691 aaPredicted RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 TIAL1Q01085 375 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCL28-201ENST00000361115 TARDBPQ13148 414 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCL28-201ENST00000361115 EFR3AQ14156 821 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 GALNT3Q14435 633 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 PTCHD3Q3KNS1 767 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 GPAT3Q53EU6 434 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ZMAT1Q5H9K5 638 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ADGRF1Q5T601 910 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 EFL1Q7Z2Z2 1120 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 SYVN1Q86TM6 617 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 HORMAD1Q86X24 394 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 KLHDC8BQ8IXV7 354 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SLC22A8Q8TCC7 542 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 RBM18Q96H35 190 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 TRNT1Q96Q11 434 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 STRADBQ9C0K7 418 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ACTL8Q9H568 366 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SYTL2Q9HCH5 934 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 C12orf4Q9NQ89 552 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CCDC59Q9P031 241 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 MKLN1Q9UL63 735 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CFL2Q9Y281 166 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 PEX16Q9Y5Y5 336 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 LYVE1Q9Y5Y7 322 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 A0A0B4J293 547 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 RTCAO00442 366 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 BRINP1O60477 761 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 VPS4BO75351 444 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 BEST1O76090 585 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ITGA2P17301 1181 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 PRKACAP17612 351 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 PAMP19021 973 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SLC6A4P31645 630 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 AKT2P31751 481 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ETV6P41212 452 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 MRPL19P49406 292 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 CXCR3P49682 368 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SERPINH1P50454 418 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 UGT2B15P54855 530 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SNRPD2P62316 118 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 ZXDBP98169 803 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 TP53BP2Q13625 1128 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ELAVL3Q14576 367 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 TIGD6Q17RP2 521 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 RFX4Q33E94 735 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 FNDC3BQ53EP0 1204 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 XKR7Q5GH72 579 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SLC46A3Q7Z3Q1 461 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 NLRP8Q86W28 1048 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 TMIEQ8NEW7 156 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ST13P5Q8NFI4 369 aaPredicted RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 APH1BQ8WW43 257 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 RNF31Q96EP0 1072 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CCDC120Q96HB5 630 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 LMLNQ96KR4 655 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CCDC115Q96NT0 180 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 VAT1Q99536 393 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CHCHD6Q9BRQ6 235 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 PRSS16Q9NQE7 514 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CUEDC1Q9NWM3 386 aaPredicted RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 ZIM2Q9NZV7 527 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 EIF2B4Q9UI10 523 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms