RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CCND2P30279 289 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ADSSP30520 456 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CCR1P32246 355 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GNL1P36915 607 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NSFP46459 744 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NR2C2P49116 596 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RGS4P49798 205 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 Q0VFX4 171 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 KIR2DS5Q14953 304 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 EXOSC7Q15024 291 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SF3B4Q15427 424 aaKnown RBP eCLIP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TRIP10Q15642 601 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ETFDHQ16134 617 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM35AQ53FP2 167 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PYHIN1Q6K0P9 492 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CAPN13Q6MZZ7 669 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 COLCA1Q6ZS62 124 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CDR2LQ86X02 465 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ADHFE1Q8IWW8 467 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 C4orf19Q8IY42 314 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CLIP4Q8N3C7 705 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 EIF1ADQ8N9N8 165 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 OR4C15Q8NGM1 316 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 OR14A16Q8NHC5 309 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SLC35C1Q96A29 364 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PGM2Q96G03 612 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 THOC3Q96J01 351 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ERGIC2Q96RQ1 377 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TRIM6Q9C030 488 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RHOJQ9H4E5 214 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 METTL7AQ9H8H3 244 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SDR39U1Q9NRG7 319 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TSPAN16Q9UKR8 245 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 AGO1Q9UL18 857 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 AKNAQ7Z591 1439 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SAMD9Q5K651 1589 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ZMYM6O95789 1325 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SPEGQ15772 3267 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 IGLV5-39A0A0G2JS06 123 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 C2orf81A6NN90 581 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 H0YL77 283 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 K7EQM0 130 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 EFNA2O43921 213 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CSO75390 466 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ERLIN1O75477 346 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RBMXL2O75526 392 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PMS2P2O95744 297 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 EPOP01588 193 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ATP1B1P05026 303 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 HNF1AP20823 631 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PTGFRP43088 359 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 AIF1P55008 147 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 MECOMQ03112 1051 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 HSF2Q03933 536 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CETN1Q12798 172 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NFATC2Q13469 925 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RIPK1Q13546 671 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GTF2H2Q13888 395 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 P2RY14Q15391 338 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 C1orf185Q5T7R7 199 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 UGT3A1Q6NUS8 523 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GTF2H2CQ6P1K8 395 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PACS1Q6VY07 963 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CCNI2Q6ZMN8 369 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PELI3Q8N2H9 469 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 DENND6BQ8NEG7 585 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 AKR7LQ8NHP1 331 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TUBGCP3Q96CW5 907 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PCED1BQ96HM7 432 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 COG3Q96JB2 828 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GPR137Q96N19 417 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TSSK2Q96PF2 358 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF607Q96SK3 696 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 MAP3K3Q99759 626 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SPAG8Q99932 426 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 AGPAT1Q99943 283 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TBC1D10AQ9BXI6 508 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NFKBIZQ9BYH8 718 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GCOM2Q9BZD3 368 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 WWP1Q9H0M0 922 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ACTL8Q9H568 366 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ZDHHC6Q9H6R6 413 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 APOBEC3GQ9HC16 384 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 OLFML3Q9NRN5 406 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GTSE1Q9NYZ3 720 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SIX4Q9UIU6 781 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 MGAT4BQ9UQ53 548 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PTCH1Q13635 1447 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ARHGEF5Q12774 1597 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NEDD4P46934 1319 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ATXN2Q99700 1313 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CLSPNQ9HAW4 1339 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 FGD5Q6ZNL6 1462 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 MED19A0JLT2 244 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM150CB9EJG8 249 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PROB1E7EW31 1015 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SYT7O43581 403 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RAMP2O60895 175 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RAD51DO75771 328 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SERPINI2O75830 405 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms