RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TRIQKQ629K1 86 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 C22orf42Q6IC83 251 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 TMEM65Q6PI78 240 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 CHTF18Q8WVB6 975 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 PCNPQ8WW12 178 aaKnown RBP17.84■□□□□ 0.45
SCARF1-202ENST00000348987 PIH1D2Q8WWB5 315 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 HYLS1Q96M11 299 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 RACGAP1Q9H0H5 632 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 PLXNA4Q9HCM2 1894 aa17.84■□□□□ 0.45
SCARF1-202ENST00000348987 LOC102723532A0A0G2JNH3 316 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 PCDH17O14917 1159 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 YY2O15391 372 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 PLOD3O60568 738 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 GCM2O75603 506 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-202ENST00000348987 CLDN7O95471 211 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 CLDN9O95484 217 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 ACPPP15309 386 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 CASP9P55211 416 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 PLD1Q13393 1074 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 CDH18Q13634 790 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 ARHGEF7Q14155 803 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 PAQR6Q6TCH4 344 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 TEX261Q6UWH6 196 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 RNF165Q6ZSG1 346 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 CHST9Q7L1S5 443 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 Q8N402 240 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 OR9Q1Q8NGQ5 310 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 CDC26Q8NHZ8 85 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 CWH43Q9H720 699 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 TXNL4BQ9NX01 149 aaKnown RBP17.83■□□□□ 0.44
SCARF1-202ENST00000348987 RWDD3Q9Y3V2 267 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 U3KQ87 197 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 PIKFYVEQ9Y2I7 2098 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 SCN2BO60939 215 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 WNT3P56703 355 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 GPR155Q7Z3F1 870 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 STK40Q8N2I9 435 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 RNF175Q8N4F7 328 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 DUSP18Q8NEJ0 188 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 COPS8Q99627 209 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 VN1R3Q9BXE9 311 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 PAK6Q9NQU5 681 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-202ENST00000348987 TMCC3Q9ULS5 477 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 KCNE2Q9Y6J6 123 aa17.83■□□□□ 0.44
SCARF1-202ENST00000348987 FABP7O15540 132 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 PROM1O43490 865 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 CSKP41240 450 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 ATN1P54259 1190 aaPredicted RBP17.82■□□□□ 0.44
SCARF1-202ENST00000348987 SELENOWP63302 87 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 NFATC2Q13469 925 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 UGT8Q16880 541 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 CDH24Q86UP0 819 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 TRIM69Q86WT6 500 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 SLC37A3Q8NCC5 494 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 GALNT11Q8NCW6 608 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 ZNF680Q8NEM1 530 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 PLD4Q96BZ4 506 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 MTERF3Q96E29 417 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 FAM129BQ96TA1 746 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 TRAF4Q9BUZ4 470 aaPredicted RBP17.82■□□□□ 0.44
SCARF1-202ENST00000348987 NDUFB11Q9NX14 153 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 ELF5Q9UKW6 265 aaPredicted RBP17.82■□□□□ 0.44
SCARF1-202ENST00000348987 TSPAN4O14817 238 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 TPST2O60704 377 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 CAV3P56539 151 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 RGS1Q08116 209 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 POU4F3Q15319 338 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 P2RY14Q15391 338 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 ANKRD54Q6NXT1 300 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 DEFB128Q7Z7B8 93 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 PHC2Q8IXK0 858 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 GPR65Q8IYL9 337 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 APCDD1Q8J025 514 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 CPA6Q8N4T0 437 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 MAGEB10Q96LZ2 347 aaPredicted RBP17.82■□□□□ 0.44
SCARF1-202ENST00000348987 HHIPQ96QV1 700 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 ELOVL6Q9H5J4 265 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 SH3BP4Q9P0V3 963 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 COMMD3Q9UBI1 195 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 LRFN2Q9ULH4 789 aa17.82■□□□□ 0.44
SCARF1-202ENST00000348987 PRAMEF25A6NGN4 478 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ATP6V1G2-DDX39BF2Z307 99 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 H7C4K7 107 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 LYRM1O43325 122 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 PQBP1O60828 265 aaKnown RBP17.81■□□□□ 0.44
SCARF1-202ENST00000348987 RFPL3O75679 317 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ALDH1A1P00352 501 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 FAM157BP0CG42 384 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ZNF7P17097 686 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-202ENST00000348987 SDC2P34741 201 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 FEN1P39748 380 aaKnown RBP17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ALDH9A1P49189 494 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 CLDN20P56880 219 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ABATP80404 500 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 MTAPQ13126 283 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ARMC12Q5T9G4 340 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 SLC8B1Q6J4K2 584 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 MZT2BQ6NZ67 158 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 TMIGD1Q6UXZ0 262 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 MYO19Q96H55 970 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms