RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 MANEALQ5VSG8 457 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 BMP8AQ7Z5Y6 402 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 CPXM2Q8N436 756 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 CHST4Q8NCG5 386 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 SETD7Q8WTS6 366 aaKnown RBP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 TAMM41Q96BW9 452 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 TMEM30AQ9NV96 361 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 FOXD2O60548 495 aaPredicted RBP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 HMGN1P05114 100 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 LINGO3P0C6S8 592 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 PTGER1P34995 402 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 RPP38P78345 283 aaKnown RBP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 LRRC26Q2I0M4 334 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 LCN8Q6JVE9 175 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 ISOC1Q96CN7 298 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 MYRFLQ96LU7 910 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 CD180Q99467 661 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 COMMD4Q9H0A8 199 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 TUBA8Q9NY65 449 aaPredicted RBP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 MRPL3P09001 348 aaKnown RBP12.46□□□□□ -0.42
VSTM4-202ENST00000332853 ZNF182P17025 639 aaPredicted RBP12.46□□□□□ -0.42
VSTM4-202ENST00000332853 CDH11P55287 796 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 CLDN2P57739 230 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 SLC7A9P82251 487 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 FLYWCH1Q4VC44 716 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 RSPO2Q6UXX9 243 aaPredicted RBP12.46□□□□□ -0.42
VSTM4-202ENST00000332853 ANKFN1Q8N957 763 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 LKAAEAR1Q8TD35 194 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 FGF13Q92913 245 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 ATOH8Q96SQ7 321 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 PIP5K1AQ99755 562 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 FAM118AQ9NWS6 357 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 CDC14AQ9UNH5 594 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 ANHXE9PGG2 379 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 HOXD8P13378 290 aaPredicted RBP12.46□□□□□ -0.42
VSTM4-202ENST00000332853 SCN1BQ07699 218 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 CHERPQ8IWX8 916 aaKnown RBP12.46□□□□□ -0.42
VSTM4-202ENST00000332853 NAGSQ8N159 534 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 TMEM125Q96AQ2 219 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 ACPTQ9BZG2 426 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 NEK6Q9HC98 313 aa12.46□□□□□ -0.42
VSTM4-202ENST00000332853 ALDOCP09972 364 aaKnown RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 HSD17B1P14061 328 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 JUNDP17535 347 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 EDNRAP25101 427 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 LIPIQ6XZB0 460 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 SPATC1Q76KD6 591 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 CBARPQ8N350 705 aaPredicted RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 MARVELD2Q8N4S9 558 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 HSPBAP1Q96EW2 488 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 TMEM80Q96HE8 168 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 MVB12BQ9H7P6 319 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 GABBR2O75899 941 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 TXNL4AP83876 142 aaKnown RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 ZCCHC12Q6PEW1 402 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 CYP4V2Q6ZWL3 525 aaPredicted RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 ATCAYQ86WG3 371 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 DTWD1Q8N5C7 304 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 FRS2Q8WU20 508 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 KCTD7Q96MP8 289 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 TMEM181Q9P2C4 612 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 ANXA2P2A6NMY6 339 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 CDRT1O95170 752 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 ANXA2P07355 339 aaKnown RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 ATP5A1P25705 553 aaKnown RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 TUBA4AP68366 448 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 E2F2Q14209 437 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 DECR1Q16698 335 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 LINGO2Q7L985 606 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 GALNT12Q8IXK2 581 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 OR7G3Q8NG95 312 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 NEK7Q8TDX7 302 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 TCF7L1Q9HCS4 588 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 ING3Q9NXR8 418 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 NOS1APO75052 506 aaPredicted RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 SDC3O75056 442 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 PENKP01210 267 aaPredicted RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 GRIK2Q13002 908 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 GINS1Q14691 196 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 TYSND1Q2T9J0 566 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 DEFB110Q30KQ9 67 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 C9orf43Q8TAL5 461 aaPredicted RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.428e-15■■■■■ 141.3
VSTM4-202ENST00000332853 SHDQ96IW2 340 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 PCDH10Q9P2E7 1040 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 RNF6Q9Y252 685 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 SIM1P81133 766 aaPredicted RBP12.45□□□□□ -0.42
VSTM4-202ENST00000332853 KCNC4Q03721 635 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 SLC36A3Q495N2 470 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 GAREM2Q75VX8 874 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 KLHDC8AQ8IYD2 350 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 LNX2Q8N448 690 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 MZB1Q8WU39 189 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 FOXJ1Q92949 421 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 PRTFDC1Q9NRG1 225 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 VAPAQ9P0L0 249 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 HCN3Q9P1Z3 774 aa12.45□□□□□ -0.42
VSTM4-202ENST00000332853 ING4Q9UNL4 249 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms