RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 KIF2BQ8N4N8 673 aa16.99■□□□□ 0.31
KLHDC4-202ENST00000316853 MIB2Q96AX9 1013 aa16.99■□□□□ 0.31
KLHDC4-202ENST00000316853 C12orf65Q9H3J6 166 aaKnown RBP16.99■□□□□ 0.31
KLHDC4-202ENST00000316853 ELOVL6Q9H5J4 265 aa16.99■□□□□ 0.31
KLHDC4-202ENST00000316853 FARSBQ9NSD9 589 aaKnown RBP16.99■□□□□ 0.31
KLHDC4-202ENST00000316853 CTNSO60931 367 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 LDB3O75112 727 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 EEDO75530 441 aaKnown RBP16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 SCELO95171 688 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 WDPCPO95876 746 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 IFNA16P05015 189 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 NUDT17P0C025 328 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 MYL2P10916 166 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 CRHR1P34998 444 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 TSFMP43897 325 aaKnown RBP16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 PRKAA2P54646 552 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 ID2Q02363 134 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 STX4Q12846 297 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 ZNF169Q14929 603 aaPredicted RBP16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 TLR1Q15399 786 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 GGTA1PQ4G0N0 100 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 CCNYL1Q8N7R7 359 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 CCDC63Q8NA47 563 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 OR1N1Q8NGS0 311 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 CAVIN3Q969G5 261 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 SNRNP40Q96DI7 357 aaKnown RBP16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 C19orf60Q96EN9 201 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 ZNF354BQ96LW1 612 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 SERPINI1Q99574 410 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■□□ 18.7
KLHDC4-202ENST00000316853 PSD3Q9NYI0 1048 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 ZNF225Q9UK10 706 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 GRID1Q9ULK0 1009 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 CLDN16Q9Y5I7 305 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 FLNCQ14315 2725 aa16.98■□□□□ 0.31
KLHDC4-202ENST00000316853 G3V2L1 256 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ZIC2O95409 532 aaPredicted RBP16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 PDYNP01213 254 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 GBAP04062 536 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 PROCP04070 461 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 BSGP35613 385 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 TAS2R50P59544 299 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 CCDC153Q494R4 210 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ACER2Q5QJU3 275 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 C18orf63Q68DL7 685 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 H3F3CQ6NXT2 135 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 CYP20A1Q6UW02 462 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ZYG11AQ6WRX3 759 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 GPR180Q86V85 440 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ATCAYQ86WG3 371 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 CRLF3Q8IUI8 442 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 BEST3Q8N1M1 668 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ZCCHC7Q8N3Z6 543 aaKnown RBP16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 CDYL2Q8N8U2 506 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 NFAM1Q8NET5 270 aaPredicted RBP16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ELP5Q8TE02 316 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 SELENOMQ8WWX9 145 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 HAS2Q92819 552 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 L3HYPDHQ96EM0 354 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ZNF717Q9BY31 904 aaPredicted RBP16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ALOXE3Q9BYJ1 711 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 MS4A12Q9NXJ0 267 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 SNX6Q9UNH7 406 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 ATG4BQ9Y4P1 393 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 PCDHGA10Q9Y5H3 936 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 SVILO95425 2214 aa16.97■□□□□ 0.31
KLHDC4-202ENST00000316853 CROCCQ5TZA2 2017 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 MAN1A2O60476 641 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 PLIN3O60664 434 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 VPS4BO75351 444 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 PRKRAO75569 313 aaKnown RBP16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 ARFIP1P53367 373 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 HNRNPH2P55795 449 aaKnown RBP16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 MEP1AQ16819 746 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 GPRIN3Q6ZVF9 776 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 NUDT13Q86X67 352 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 OR4N5Q8IXE1 308 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 SLC5A8Q8N695 610 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 CCDC126Q96EE4 140 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 HBEGFQ99075 208 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 NPAS2Q99743 824 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 MRPL1Q9BYD6 325 aaKnown RBP16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 CDCP1Q9H5V8 836 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 CLMPQ9H6B4 373 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 RPF2Q9H7B2 306 aaKnown RBP16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 DDX31Q9H8H2 851 aaKnown RBP16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 ASF1BQ9NVP2 202 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 TRPS1Q9UHF7 1281 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 PHF11Q9UIL8 331 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 PPT2Q9UMR5 302 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 VPS4AQ9UN37 437 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 SLC12A4Q9UP95 1085 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 COPG1Q9Y678 874 aaKnown RBP16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 RELNP78509 3460 aa16.96■□□□□ 0.31
KLHDC4-202ENST00000316853 ESPL1Q14674 2120 aa16.96■□□□□ 0.3
KLHDC4-202ENST00000316853 A0A0A6YYD5 115 aa16.95■□□□□ 0.3
KLHDC4-202ENST00000316853 TMPRSS11DO60235 418 aa16.95■□□□□ 0.3
KLHDC4-202ENST00000316853 MLYCDO95822 493 aa16.95■□□□□ 0.3
KLHDC4-202ENST00000316853 FAM58BPP0C7Q3 252 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms