RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SLC30A3Q99726 388 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 A0A0U1RQS6 177 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 PLOD2O00469 737 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 TLX3O43711 291 aaPredicted RBP13.22□□□□□ -0.29
SPAST-201ENST00000315285 PCDHGA12O60330 932 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 APOL3O95236 402 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 CSF2P04141 144 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 DCTP40126 519 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 GJA8P48165 433 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 FIBINQ8TAL6 211 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 RAB7BQ96AH8 199 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 ZNF597Q96LX8 424 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 C3orf30Q96M34 536 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 AHDC1Q5TGY3 1603 aaPredicted RBP13.22□□□□□ -0.29
SPAST-201ENST00000315285 SLC35F4A4IF30 521 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 VEGFDO43915 354 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 SLC6A6P31641 620 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 SHMT2P34897 504 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 TAS2R43P59537 309 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 MAB21L1Q13394 359 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 SWI5Q1ZZU3 235 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 NRROSQ86YC3 692 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 SNX29P2Q8IUI4 249 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 SLC22A15Q8IZD6 547 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 YIPF7Q8N8F6 280 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 MDGA1Q8NFP4 955 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 SGIP1Q9BQI5 828 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 B4GALT2O60909 372 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 AFF1P51825 1210 aaKnown RBP13.21□□□□□ -0.29
SPAST-201ENST00000315285 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.29
SPAST-201ENST00000315285 AMZ1Q400G9 498 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 SETD7Q8WTS6 366 aaKnown RBP13.21□□□□□ -0.29
SPAST-201ENST00000315285 DPYSL5Q9BPU6 564 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 PRRG4Q9BZD6 226 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 LHPPQ9H008 270 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 PCDHGB5Q9Y5G0 923 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 USP3Q9Y6I4 520 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 PRRC2BQ5JSZ5 2229 aaKnown RBP13.21□□□□□ -0.29
SPAST-201ENST00000315285 ISPDA4D126 451 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 RTCAO00442 366 aaKnown RBP13.21□□□□□ -0.29
SPAST-201ENST00000315285 TRIM3O75382 744 aaPredicted RBP13.21□□□□□ -0.29
SPAST-201ENST00000315285 SEMA3DO95025 777 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 ADH1BP00325 375 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 CTSOP43234 321 aaPredicted RBP13.21□□□□□ -0.29
SPAST-201ENST00000315285 NRIP1P48552 1158 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 PUDPQ08623 228 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 SPHARQ15513 63 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 FBXO42Q6P3S6 717 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 TM9SF2Q99805 663 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 INPP5KQ9BT40 448 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 VAPAQ9P0L0 249 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 IFT52Q9Y366 437 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 DDX60Q8IY21 1712 aaKnown RBP13.21□□□□□ -0.29
SPAST-201ENST00000315285 NWD2Q9ULI1 1742 aa13.21□□□□□ -0.29
SPAST-201ENST00000315285 LOC285095A0A1B0GVY8 99 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 GRXCR2A6NFK2 248 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 DRGXA6NNA5 263 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 PSMD9O00233 223 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 SCDO00767 359 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.3
SPAST-201ENST00000315285 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.3
SPAST-201ENST00000315285 ARF5P84085 180 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 OR52E8Q6IFG1 317 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 PAQR9Q6ZVX9 377 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 GALNT12Q8IXK2 581 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 SUN5Q8TC36 379 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 MAL2Q969L2 176 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 ENAMQ9NRM1 1142 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 UCKL1Q9NWZ5 548 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 GNG8Q9UK08 70 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 MRPS17Q9Y2R5 130 aaKnown RBP13.21□□□□□ -0.3
SPAST-201ENST00000315285 MYH9P35579 1960 aaKnown RBP13.21□□□□□ -0.3
SPAST-201ENST00000315285 ZNF670-ZNF695F2Z2N8 137 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 KIAA0513O60268 411 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 SLC16A8O95907 504 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 ATF6P18850 670 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 KCNC1P48547 511 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 ZNF181Q2M3W8 571 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 GFOD2Q3B7J2 385 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 FANK1Q8TC84 345 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 C15orf40Q8WUR7 153 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 TFAP2CQ92754 450 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 EPYCQ99645 322 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 RIMS3Q9UJD0 308 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 WDR37Q9Y2I8 494 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 PCDHGA2Q9Y5H1 932 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 GPR45Q9Y5Y3 372 aa13.21□□□□□ -0.3
SPAST-201ENST00000315285 TCRBV3S1A0A5B6 114 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 OR14I1A6ND48 311 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 E7EQ34 232 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 SRCP12931 536 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 HYAL2Q12891 473 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 MANEALQ5VSG8 457 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 CES4AQ5XG92 561 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 ZNF627Q7L945 461 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 PSD4Q8NDX1 1056 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 OR2AJ1Q8NGZ0 328 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms