RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OXR1Q8N573 874 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 AQP11Q8NBQ7 271 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 RAB8BQ92930 207 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 CXorf40BQ96DE9 158 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 TXNDC15Q96J42 360 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 F2RL3Q96RI0 385 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 MYNNQ9NPC7 610 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 IMPAD1Q9NX62 359 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 MS4A12Q9NXJ0 267 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 DUSP12Q9UNI6 340 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 FEZF1A0PJY2 475 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 PSMD11O00231 422 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 KCNK2O95069 426 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 GADD45GO95257 159 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 RECKO95980 971 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 CDK1P06493 297 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 ANXA8P13928 327 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 DDX6P26196 483 aaKnown RBP eCLIP12.3□□□□□ -0.44
HIF3A-204ENST00000300862 PSMB5P28074 263 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 CTNNB1P35222 781 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 GRK3P35626 688 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 CTSKP43235 329 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 NR4A2P43354 598 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 PPP5CP53041 499 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 ST3GAL4Q11206 333 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 BCL7AQ4VC05 210 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 PRAMEF14Q5SWL7 426 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 PRAMEF13Q5VWM6 474 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 LYSMD2Q8IV50 215 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 STX19Q8N4C7 294 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 ZNF557Q8N988 423 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-204ENST00000300862 ZNF675Q8TD23 568 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 UCN3Q969E3 161 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 WDR34Q96EX3 536 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 LRIG1Q96JA1 1093 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 PIP5K1AQ99755 562 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 RSPO3Q9BXY4 272 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-204ENST00000300862 C6orf62Q9GZU0 229 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-204ENST00000300862 HOXD1Q9GZZ0 328 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 OR51E2Q9H255 320 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 ZNF556Q9HAH1 456 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 CPNE5Q9HCH3 593 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 ABCB10Q9NRK6 738 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 MARK1Q9P0L2 795 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 SLC23A2Q9UGH3 650 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 TAC3Q9UHF0 121 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 OSGIN1Q9UJX0 560 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 MAPRE3Q9UPY8 281 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 POFUT2Q9Y2G5 429 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 SNX11Q9Y5W9 270 aa12.3□□□□□ -0.44
HIF3A-204ENST00000300862 A0A0G2JN53 185 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 TLL1O43897 1013 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 UPK1BO75841 260 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 PAPLNO95428 1278 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 GASTP01350 101 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 IGFBP1P08833 259 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 ACADLP28330 430 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 BMPR1AP36894 532 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 XCR1P46094 333 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 CNTN1Q12860 1018 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 PTGES3Q15185 160 aaKnown RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 COLEC12Q5KU26 742 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 C9orf64Q5T6V5 341 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 CEACAM20Q6UY09 585 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 NANOGNBQ7Z5D8 188 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 AKAP14Q86UN6 197 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 ADGRF3Q8IZF5 1079 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 GEMIN6Q8WXD5 167 aaKnown RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 MYDGFQ969H8 173 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 DACH2Q96NX9 599 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 TMEM38AQ9H6F2 299 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 CUEDC1Q9NWM3 386 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 SAGE1Q9NXZ1 904 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 CKAP5Q14008 2032 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 ANKDD1BA6NHY2 528 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 CLDN24A6NM45 220 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 PLPP1O14494 284 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 TBX6O95947 436 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 STATHP02808 62 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 EIF2S1P05198 315 aaKnown RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 BCHEP06276 602 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 ADORA3P0DMS8 318 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 SPNP16150 400 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 GABRB1P18505 474 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 FEN1P39748 380 aaKnown RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 DSTNP60981 165 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 RBBP4Q09028 425 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 HSPB3Q12988 150 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 FADDQ13158 208 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 TP53BP2Q13625 1128 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 PUM1Q14671 1186 aaKnown RBP eCLIP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 SLC9B2Q86UD5 537 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 LACC1Q8IV20 430 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 MMAAQ8IVH4 418 aaKnown RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 CLIP4Q8N3C7 705 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 HORMAD2Q8N7B1 307 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 FBXO15Q8NCQ5 510 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 B3GNT7Q8NFL0 401 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 ZCCHC2Q9C0B9 1178 aaKnown RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 SP140LQ9H930 580 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms