RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GPR155Q7Z3F1 870 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 DNAJC22Q8N4W6 341 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 CSGALNACT1Q8TDX6 532 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 MKLN1Q9UL63 735 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 PNMA8CA0A1B0GUJ8 204 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 MAGEB17A8MXT2 336 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 ETV6P41212 452 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 CDK3Q00526 305 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 TEKQ02763 1124 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 SRSF11Q05519 484 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 CARTPTQ16568 116 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 GALNT10Q86SR1 603 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 OR56A3Q8NH54 315 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 SPATA9Q9BWV2 254 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 SPASTQ9UBP0 616 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 PCDHGB3Q9Y5G1 929 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 PCDHGA3Q9Y5H0 932 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 LATO43561 262 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 PRMT3O60678 531 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 GTF2E2P29084 291 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 MEF2AQ02078 507 aaPredicted RBP17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 THOC7Q6I9Y2 204 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 CCBE1Q6UXH8 406 aaPredicted RBP17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 TMPRSS11BQ86T26 416 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 CCDC103Q8IW40 242 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 WDR20Q8TBZ3 569 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 ZNF675Q8TD23 568 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 CAPSLQ8WWF8 208 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 COX14Q96I36 57 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 C7orf34Q96L11 122 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 REXO4Q9GZR2 422 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 NPAP1Q9NZP6 1156 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 ZFR2Q9UPR6 939 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 NUP214P35658 2090 aaPredicted RBP17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 CKAP5Q14008 2032 aa17.49■□□□□ 0.39
PDLIM3-201ENST00000284767 SERTM1A2A2V5 107 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 AMD1P17707 334 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 ALOX12P18054 663 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 SLC19A1P41440 591 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 LIMK1P53667 647 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 ENPP2Q13822 863 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 GPR153Q6NV75 609 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 OR5AR1Q8NGP9 310 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 OR2L2Q8NH16 312 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 GANCQ8TET4 914 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 ATL1Q8WXF7 558 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 GGHQ92820 318 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 RAB7BQ96AH8 199 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 COL21A1Q96P44 957 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 ZDHHC5Q9C0B5 715 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 SCAMP1O15126 338 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 APOA1P02647 267 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 C1QCP02747 245 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 TCEA1P23193 301 aaKnown RBP17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 LTBRP36941 435 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 OLR1P78380 273 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 SYNPOQ8N3V7 929 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 CDC26Q8NHZ8 85 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 FCRL1Q96LA6 429 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 RMI1Q9H9A7 625 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 SGK2Q9HBY8 427 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 NEK6Q9HC98 313 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 FAM120CQ9NX05 1096 aaKnown RBP17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 PCDHGB6Q9Y5F9 930 aa17.48■□□□□ 0.39
PDLIM3-201ENST00000284767 USP34Q70CQ2 3546 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 VIPP01282 170 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 ACADLP28330 430 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 MAT2AP31153 395 aaKnown RBP17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 NR4A2P43354 598 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 TMEM196Q5HYL7 178 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 TOR1AIP1Q5JTV8 583 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 IER5LQ5T953 404 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 LIPJQ5W064 366 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 NOXRED1Q6NXP6 359 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 ZNF621Q6ZSS3 439 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 GDPD3Q7L5L3 318 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 KCNC2Q96PR1 638 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 ASF1AQ9Y294 204 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 PADI2Q9Y2J8 665 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 MGAT4DA6NG13 374 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 SCN2BO60939 215 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 NPPBP16860 134 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 GRK5P34947 590 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 UGT2B15P54855 530 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 KCNJ10P78508 379 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 AGAP6Q5VW22 663 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 CRELD1Q96HD1 420 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 TPD52L3Q96J77 140 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 AGAP4Q96P64 663 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 OR52A5Q9H2C5 316 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 SPNS1Q9H2V7 528 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 FZD3Q9NPG1 666 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 ADPRHL2Q9NX46 363 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 GPR34Q9UPC5 381 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 KLK4Q9Y5K2 254 aa17.47■□□□□ 0.39
PDLIM3-201ENST00000284767 LOC100506127A0A0U1RQW1 187 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 LOC110117498-PIK3R3F6TDL0 507 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 NKX2-5P52952 324 aaPredicted RBP17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 WNT3P56703 355 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 TAP2Q03519 686 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms