RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 A0A1B0GTL3 188 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 C5orf52A6NGY3 159 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 BRINP1O60477 761 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 SCELO95171 688 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 RECKO95980 971 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 ZNF8P17098 575 aaPredicted RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 TSPAN5P62079 268 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 TOMM20Q15388 145 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 XKR9Q5GH70 373 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 NOMO2Q5JPE7 1267 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 NCBP2-AS2Q69YL0 99 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 WASH2PQ6VEQ5 465 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 TMEM91Q6ZNR0 172 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 IKBIPQ70UQ0 350 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 PID1Q7Z2X4 250 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 SPATA19Q7Z5L4 167 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 GPR149Q86SP6 731 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 PDZD3Q86UT5 571 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 CLDN22Q8N7P3 220 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 SCARB1Q8WTV0 552 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 CNOT9Q92600 299 aaKnown RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 L3HYPDHQ96EM0 354 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 LURAP1Q96LR2 239 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 KCNC2Q96PR1 638 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 BRINP2Q9C0B6 783 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 LATS2Q9NRM7 1088 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 COMMD3Q9UBI1 195 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 DENND4AQ7Z401 1863 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 MEX3AA1L020 520 aaKnown RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 OR2W5A6NFC9 320 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 CASC3O15234 703 aaKnown RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 CD3EAPO15446 510 aaKnown RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 PRG2P13727 222 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 ITPKAP23677 461 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 CALCRP30988 508 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 DNAJA1P31689 397 aaKnown RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 MAGEA2P43356 314 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 RNF144AP50876 292 aaPredicted RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 NR0B1P51843 470 aaKnown RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 BACE1P56817 501 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 ECH1Q13011 328 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 TMEM132BQ14DG7 1078 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 NR6A1Q15406 480 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 RNF212Q495C1 297 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 AVPI1Q5T686 147 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 ZFAND4Q86XD8 727 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 PDZD9Q8IXQ8 264 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 NLGN2Q8NFZ4 835 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 OR8J3Q8NGG0 315 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 HS6ST2Q96MM7 605 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 NTPCRQ9BSD7 190 aaKnown RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 CDHR5Q9HBB8 845 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 PDGFCQ9NRA1 345 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 MS4A12Q9NXJ0 267 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 TREM2Q9NZC2 230 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 MPP6Q9NZW5 540 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 SH3BP4Q9P0V3 963 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 HCN2Q9UL51 889 aa8.83□□□□□ -1
PDGFC-201ENST00000274071 CFAP20Q9Y6A4 193 aaKnown RBP8.83□□□□□ -1
PDGFC-201ENST00000274071 HYKKA2RU49 373 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 LRRC14BA6NHZ5 514 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 ARVCFO00192 962 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 GPR31O00270 319 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 UBE2CO00762 179 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 IL1AP01583 271 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 GP1BAP07359 652 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 PRR35P0CG20 571 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 SULT1A3P0DMM9 295 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 SULT1A4P0DMN0 295 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 EDN3P14138 238 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 HOXB8P17481 243 aaPredicted RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 GABRB1P18505 474 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 ATXN1P54253 815 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 ILKQ13418 452 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 PWP1Q13610 501 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 TARBP2Q15633 366 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 TKFCQ3LXA3 575 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 FAM109BQ6ICB4 259 aaPredicted RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 ASPGQ86U10 573 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 FAM126BQ8IXS8 530 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 PUSL1Q8N0Z8 303 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 C9orf43Q8TAL5 461 aaPredicted RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 BRI3BPQ8WY22 251 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 OR2M2Q96R28 347 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 TAAR1Q96RJ0 339 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 DHCR7Q9UBM7 475 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 STUB1Q9UNE7 303 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 AP1M2Q9Y6Q5 423 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 A0A087WZ62 844 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 MDM4O15151 490 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 AKR7A3O95154 331 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 AP2A1O95782 977 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 FPR1P21462 350 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 GGT2P36268 569 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 IDH2P48735 452 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 MRPL19P49406 292 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 CTBP2P56545 445 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 GRIN2CQ14957 1233 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 ARHGAP15Q53QZ3 475 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms