RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr135Q8VEY4 312 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Golga7Q91W53 137 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Dcp1aQ91YD3 602 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Entpd4Q9DBT4 613 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Clca3a2Q9EQR4 902 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Clca3a1Q9QX15 902 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Znf354bQ9QXT9 601 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Grin3aA2AIR5 1135 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tex16F6WNY1 1150 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Dnase1l3O55070 310 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fpr-rs3O88537 343 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Crhr2Q60748 411 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ppp1r15bQ8BFW3 697 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cox15Q8BJ03 413 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Col23a1Q8K4G2 532 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pcdhga3Q91XY5 928 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp869Q9DC47 529 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cdc42ep5Q9Z0X0 150 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Slc43a3A2AVZ9 502 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Adh5P28474 374 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Actr1aP61164 376 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ufm1P61961 85 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Foxd3Q61060 465 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr847Q8VFF4 312 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gorasp1Q91X51 446 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Spatc1lQ9D9W0 342 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Il1rl2Q9ERS7 574 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r97K7N6Z2 861 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gdi1P50396 447 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 S100a11P50543 98 aaKnown RBP11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zim1Q8C393 579 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 CcinQ8CDE2 588 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr722Q8VFC8 308 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Bcas2Q9D287 225 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pfdn5Q9WU28 154 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gsk3bQ9WV60 420 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm14744B1AVU4 173 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Phox2bO35690 314 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Klf10O89091 479 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 ThpoP40226 356 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 AnpepP97449 966 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm648Q3UJ22 213 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Q504N7 393 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1505Q7TQQ2 316 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr651Q8VG78 313 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 5430402E10RikQ9D3N5 173 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 PrebQ9WUQ2 417 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sult2a6B2RVI8 285 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 BC117090L7N257 96 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Mknk1O08605 427 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lmo2P25801 158 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Agtr2P35374 363 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Slain1Q68FF7 579 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 EfhbQ8CDU5 853 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cldn4O35054 210 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Apoc1P34928 88 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gch1Q05915 241 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 PtprcapQ64697 197 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 PdprQ7TSQ8 878 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tex29Q9DA77 186 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Qser1A2BIE1 1698 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1375A0A0N4SUP0 313 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r18E9Q280 788 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rnpepl1G5E872 720 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r111K7N674 857 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ctla2bP12400 113 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Hoxb9P20615 250 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Bdkrb2P32299 392 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tbxas1P36423 533 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Nrsn1P97799 196 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm8332Q3UTA4 144 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 KrtdapQ3V2T4 102 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1047Q8VGS0 319 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sult1b1Q9QWG7 299 aa11.54□□□□□ -0.56
Trim56-201ENSMUST00000054384 IqccA2ADZ8 418 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 MafbP54841 323 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ctbp2P56546 445 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr318Q5NCD7 306 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rpl10Q6ZWV3 214 aaKnown RBP11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cmtm2aQ9DAR1 169 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rp2Q9EPK2 347 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Dnajb9Q9QYI6 222 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Hipk2Q9QZR5 1196 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Acta2P62737 377 aaKnown RBP11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Actg2P63268 376 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zdhhc11Q14AK4 347 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rnf157Q3TEL6 685 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr328Q5NCD3 310 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ccdc36Q6PDM4 574 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ccm2lQ8VCC6 481 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1278Q8VF39 313 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 SardhQ99LB7 919 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 AhspQ9CY02 102 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 2010109A12RikQ9D875 119 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tubb3Q9ERD7 450 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Spata31d1aE9QA35 1336 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fpr-rs4A4FUQ5 323 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Esp15A8R0U8 85 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Izumo4D3Z690 227 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r21K7N6Y7 853 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 99.1 ms