RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 FAM83EQ2M2I3 478 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 MED27Q6P2C8 311 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 RPTNQ6XPR3 784 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 Q6ZPB1 254 aaPredicted RBP14.75□□□□□ -0.05
VRK3-221ENST00000600284 CHSY3Q70JA7 882 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.75□□□□□ -0.05
VRK3-221ENST00000600284 C17orf53Q8N3J3 647 aaPredicted RBP14.75□□□□□ -0.05
VRK3-221ENST00000600284 TMEM132CQ8N3T6 1108 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 POGLUT1Q8NBL1 392 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 ZNF473Q8WTR7 871 aaKnown RBP14.75□□□□□ -0.05
VRK3-221ENST00000600284 F2RL3Q96RI0 385 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 CCDC77Q9BR77 488 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 ADAP2Q9NPF8 381 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 KCMF1Q9P0J7 381 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 OPTCQ9UBM4 332 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 ENTPD4Q9Y227 616 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 ZNF835Q9Y2P0 537 aa14.75□□□□□ -0.05
VRK3-221ENST00000600284 TRBV11-1A0A0K0K1C0 115 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 SUPT3HB4E1H0 165 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 ASNA1O43681 348 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 SUPT3HO75486 399 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 ZFAND5O76080 213 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 SCELO95171 688 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 EPB42P16452 691 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 CERS1P27544 350 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 PHBP35232 272 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 MSH2P43246 934 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 ST13P50502 369 aaKnown RBP14.74□□□□□ -0.05
VRK3-221ENST00000600284 HNRNPFP52597 415 aaKnown RBP14.74□□□□□ -0.05
VRK3-221ENST00000600284 SRSF11Q05519 484 aaKnown RBP14.74□□□□□ -0.05
VRK3-221ENST00000600284 ELAVL1Q15717 326 aaKnown RBP14.74□□□□□ -0.05
VRK3-221ENST00000600284 ADNP2Q6IQ32 1131 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 C8orf74Q6P047 294 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 CEP128Q6ZU80 1094 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 ZNF227Q86WZ6 799 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 SIAH3Q8IW03 269 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 FAM47BQ8NA70 645 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 TMEM52Q8NDY8 209 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 DAZLQ92904 295 aaKnown RBP14.74□□□□□ -0.05
VRK3-221ENST00000600284 EXT2Q93063 718 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 NCLNQ969V3 563 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 NXNL1Q96CM4 212 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 CCDC120Q96HB5 630 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 MS4A8Q9BY19 250 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 ZDHHC18Q9NUE0 388 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 VTI1BQ9UEU0 232 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 FBXW2Q9UKT8 454 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 KLF13Q9Y2Y9 288 aaPredicted RBP14.74□□□□□ -0.05
VRK3-221ENST00000600284 YARS2Q9Y2Z4 477 aaKnown RBP14.74□□□□□ -0.05
VRK3-221ENST00000600284 TSC22D4Q9Y3Q8 395 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 ASB1Q9Y576 335 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 KLF2Q9Y5W3 355 aaPredicted RBP14.74□□□□□ -0.05
VRK3-221ENST00000600284 SPACA6W5XKT8 324 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 NOTCH2Q04721 2471 aa14.74□□□□□ -0.05
VRK3-221ENST00000600284 CROCCQ5TZA2 2017 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 NPIPA5E9PKD4 350 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 KLRC4-KLRK1H3BQV0 150 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 TGFBR3LH3BV60 316 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 UBXN8O00124 270 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 ITGA10O75578 1167 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 WISP2O76076 250 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 C2P06681 752 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 MTHFD2P13995 350 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 ATP5A1P25705 553 aaKnown RBP14.73□□□□□ -0.05
VRK3-221ENST00000600284 ARFIP1P53367 373 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 SLC7A5Q01650 507 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 STX4Q12846 297 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 BIKQ13323 160 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 SERTAD2Q14140 314 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 NAA30Q147X3 362 aaPredicted RBP14.73□□□□□ -0.05
VRK3-221ENST00000600284 ACAP2Q15057 778 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 SP5Q6BEB4 398 aaPredicted RBP14.73□□□□□ -0.05
VRK3-221ENST00000600284 GRHL2Q6ISB3 625 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 BNC2Q6ZN30 1099 aaPredicted RBP14.73□□□□□ -0.05
VRK3-221ENST00000600284 UBE3DQ7Z6J8 389 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 SPPL2CQ8IUH8 684 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 RELL1Q8IUW5 271 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 GPALPP1Q8IXQ4 340 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 CENPLQ8N0S6 344 aaPredicted RBP14.73□□□□□ -0.05
VRK3-221ENST00000600284 GHDCQ8N2G8 530 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 ZNF808Q8N4W9 903 aaPredicted RBP14.73□□□□□ -0.05
VRK3-221ENST00000600284 TMEM156Q8N614 296 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 ACOT4Q8N9L9 421 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 MORN4Q8NDC4 146 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 OR7G3Q8NG95 312 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 ITLN2Q8WWU7 325 aaPredicted RBP14.73□□□□□ -0.05
VRK3-221ENST00000600284 CMTM7Q96FZ5 175 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 MAGED4Q96JG8 741 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 LRRC1Q9BTT6 524 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 ALOXE3Q9BYJ1 711 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 TSPYL1Q9H0U9 437 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 ZNF223Q9UK11 482 aaPredicted RBP14.73□□□□□ -0.05
VRK3-221ENST00000600284 NPIPA1Q9UND3 350 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 CLCA3PQ9Y6N3 262 aa14.73□□□□□ -0.05
VRK3-221ENST00000600284 ESYT3A0FGR9 886 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 HNRNPRO43390 633 aaKnown RBP14.72□□□□□ -0.05
VRK3-221ENST00000600284 KLHL2O95198 593 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 IFNA16P05015 189 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 ZNF24P17028 368 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 AGAP20933 346 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms