RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 KLF11O14901 512 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 HDAC3O15379 428 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 AKAP10O43572 662 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 TMPRSS11DO60235 418 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 CNOT3O75175 753 aaKnown RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 SNUPNO95149 360 aaKnown RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 LRATO95237 230 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 FHP07954 510 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 ITPKBP27987 946 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 PTPN4P29074 926 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 TPP2P29144 1249 aaPredicted RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 EPHA3P29320 983 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 TLX1P31314 330 aaPredicted RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 GCGRP47871 477 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 AQP5P55064 265 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 HNRNPH2P55795 449 aaKnown RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 RAB38P57729 211 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 TAS2R50P59544 299 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 BTG2P78543 158 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 KLC1Q07866 573 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 C2orf80Q0P641 193 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 TBL3Q12788 808 aaKnown RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 SLC13A2Q13183 592 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 MAP7Q14244 749 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 NCF4Q15080 339 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 SLC9B1Q4ZJI4 515 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 SPIN4Q56A73 249 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 C10orf62Q5T681 223 aaPredicted RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 ATP1A1-AS1Q5TC04 95 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 ZNF385CQ66K41 422 aaPredicted RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 NIPAL1Q6NVV3 410 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 NOXRED1Q6NXP6 359 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 FAM198BQ6UWH4 519 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 CCDC81Q6ZN84 652 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 Q6ZSR9 355 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 GPR180Q86V85 440 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 DTX1Q86Y01 620 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 LRRC34Q8IZ02 419 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 ZSCAN1Q8NBB4 408 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 DOK4Q8TEW6 326 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 METTL21AQ8WXB1 218 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 TBC1D20Q96BZ9 403 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 MARK4Q96L34 752 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 PPP3R2Q96LZ3 170 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 RILPQ96NA2 401 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 PTCHD1Q96NR3 888 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 TSSK3Q96PN8 268 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 CSF3RQ99062 836 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 AKTIPQ9H8T0 292 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 WDR41Q9HAD4 459 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 MKKSQ9NPJ1 570 aaPredicted RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 PRTFDC1Q9NRG1 225 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 FGFR1OP2Q9NVK5 253 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 LYARQ9NX58 379 aaKnown RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 PSD3Q9NYI0 1048 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 VTI1BQ9UEU0 232 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 PHF11Q9UIL8 331 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 KCND3Q9UK17 655 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 MRPS33Q9Y291 106 aaKnown RBP8.78□□□□□ -1
ZNF548-206ENST00000597047 TSC22D4Q9Y3Q8 395 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 ATG4BQ9Y4P1 393 aa8.78□□□□□ -1
ZNF548-206ENST00000597047 FER1L5A0AVI2 2057 aa8.77□□□□□ -1
ZNF548-206ENST00000597047 IGHV3-20A0A0C4DH32 117 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 A0A0G2JND7 137 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 IDSB3KWA1 339 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 SLCO1B7G3V0H7 640 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 PGRMC2O15173 223 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 NKX2-8O15522 239 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 PRMT3O60678 531 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 EDF1O60869 148 aaKnown RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 LDB3O75112 727 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 ERAL1O75616 437 aaKnown RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 RSL1D1O76021 490 aaKnown RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 SEMA3DO95025 777 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 BMP10O95393 424 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 IFNA16P05015 189 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 IL3P08700 152 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 RAB40ALP0C0E4 278 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 C8orf89P0DMQ9 161 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 TNNI3P19429 210 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 MAOAP21397 527 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 JAK1P23458 1154 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 TIA1P31483 386 aaKnown RBP eCLIP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 BUD31P41223 144 aaPredicted RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 HNRNPFP52597 415 aaKnown RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 RAE1P78406 368 aaKnown RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 MC1RQ01726 317 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 EEF1A2Q05639 463 aaKnown RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 ZNF33BQ06732 778 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 ACTN3Q08043 901 aaPredicted RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 STX4Q12846 297 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 RPS6KA2Q15349 733 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 RFTN2Q52LD8 501 aaPredicted RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 IL23RQ5VWK5 629 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 FAM180BQ6P0A1 224 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 ACAD11Q709F0 780 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 ZC3H7AQ8IWR0 971 aaKnown RBP8.77□□□□□ -1.01
ZNF548-206ENST00000597047 SPACA3Q8IXA5 215 aa8.77□□□□□ -1.01
ZNF548-206ENST00000597047 KIRREL3Q8IZU9 778 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms