RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 EMBQ6PCB8 327 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 RPS27LQ71UM5 84 aaKnown RBP13.62□□□□□ -0.23
DDX39A-217ENST00000592391 SCUBE1Q8IWY4 988 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 CYP4X1Q8N118 509 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 TMEM52Q8NDY8 209 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 CPT1CQ8TCG5 803 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 AENQ8WTP8 325 aaKnown RBP13.62□□□□□ -0.23
DDX39A-217ENST00000592391 MIB2Q96AX9 1013 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 MAGEB10Q96LZ2 347 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-217ENST00000592391 CSF3RQ99062 836 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 PRTFDC1Q9NRG1 225 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 KCMF1Q9P0J7 381 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX39A-217ENST00000592391 PPT2Q9UMR5 302 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 CSAG2Q9Y5P2 127 aa13.62□□□□□ -0.23
DDX39A-217ENST00000592391 V9GYY5 206 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-217ENST00000592391 SYNDIG1LA6NDD5 238 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 FOXO6A8MYZ6 492 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 PLPP1O14494 284 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 GLRA3O75311 464 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 NUDT17P0C025 328 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 NEK2P51955 445 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 CDH13P55290 713 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 SLC26A5P58743 744 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 SLC13A2Q13183 592 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 CUL3Q13618 768 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 INPP5JQ15735 1006 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-217ENST00000592391 IGFBP7Q16270 282 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 ZNF678Q5SXM1 525 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 FRG2Q64ET8 278 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 B3GNTL1Q67FW5 361 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-217ENST00000592391 H3F3CQ6NXT2 135 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 MILR1Q7Z6M3 343 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 CUZD1Q86UP6 607 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 SLC22A9Q8IVM8 553 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 IQCKQ8N0W5 287 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 OR4F6Q8NGB9 312 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 DNAJB14Q8TBM8 379 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 CAVIN3Q969G5 261 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 TMEM237Q96Q45 408 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 FRG2BQ96QU4 278 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 MAPKAP1Q9BPZ7 522 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 SORBS1Q9BX66 1292 aaKnown RBP13.61□□□□□ -0.23
DDX39A-217ENST00000592391 KCNK13Q9HB14 408 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 TEKT2Q9UIF3 430 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 EMCNQ9ULC0 261 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 PLAAQ9Y263 795 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 CLDN16Q9Y5I7 305 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 SPACA6W5XKT8 324 aa13.61□□□□□ -0.23
DDX39A-217ENST00000592391 A0A1B0GTL3 188 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 DYTNA2CJ06 578 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 BLACEA4D250 179 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 SAGE2PA6NJ88 616 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 A8MUI8 341 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 TGFBR3LH3BV60 316 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 PPP6CO00743 305 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 CTNSO60931 367 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 SUPT7LO94864 414 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ETHE1O95571 254 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 TSPAN8P19075 237 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 IMPDH1P20839 514 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 CCT5P48643 541 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 PRKAA2P54646 552 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ARG2P78540 354 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 KCNC4Q03721 635 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 CLCQ05315 142 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ZNF33BQ06732 778 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 IFT88Q13099 833 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 SLAMF1Q13291 335 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 TLR1Q15399 786 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 TERF2Q15554 542 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ERCC6LQ2NKX8 1250 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 UNC50Q53HI1 259 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ABHD17BQ5VST6 288 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 TTC19Q6DKK2 380 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-217ENST00000592391 LETMD1Q6P1Q0 360 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ZCCHC7Q8N3Z6 543 aaKnown RBP13.6□□□□□ -0.23
DDX39A-217ENST00000592391 EFCAB3Q8N7B9 438 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 MYRIPQ8NFW9 859 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 OR2W6PQ8NHA6 318 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ELP5Q8TE02 316 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 TRPC4APQ8TEL6 797 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 HAS2Q92819 552 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 MTFMTQ96DP5 389 aaKnown RBP13.6□□□□□ -0.23
DDX39A-217ENST00000592391 CNDP1Q96KN2 507 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ZNF354BQ96LW1 612 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 ZNF717Q9BY31 904 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-217ENST00000592391 RNF32Q9H0A6 362 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 TRPS1Q9UHF7 1281 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 PCDHGA10Q9Y5H3 936 aa13.6□□□□□ -0.23
DDX39A-217ENST00000592391 SEMA3DO95025 777 aa13.59□□□□□ -0.23
DDX39A-217ENST00000592391 PROCP04070 461 aa13.59□□□□□ -0.23
DDX39A-217ENST00000592391 KRT4P19013 534 aa13.59□□□□□ -0.23
DDX39A-217ENST00000592391 CRHR1P34998 444 aa13.59□□□□□ -0.23
DDX39A-217ENST00000592391 BSGP35613 385 aa13.59□□□□□ -0.23
DDX39A-217ENST00000592391 ZNF169Q14929 603 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-217ENST00000592391 PRR30Q53SZ7 412 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-217ENST00000592391 ZYG11AQ6WRX3 759 aa13.59□□□□□ -0.23
DDX39A-217ENST00000592391 RIBC1Q8N443 379 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms