RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CXorf40BQ96DE9 158 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 FERD3LQ96RJ6 166 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 SLC6A16Q9GZN6 736 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 SIAEQ9HAT2 523 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 GPATCH2Q9NW75 528 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 GDE1Q9NZC3 331 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 CEP290O15078 2479 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 GPR37L1O60883 481 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 INMTO95050 263 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 POU2F2P09086 479 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 S100A1P23297 94 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 TIE1P35590 1138 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 RPL3P39023 403 aaKnown RBP13.06□□□□□ -0.32
SRSF1-205ENST00000582730 MAPK12P53778 367 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 TPTEP56180 551 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 TAS2R38P59533 333 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 SELENBP1Q13228 472 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 CDK5R2Q13319 367 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 E2F2Q14209 437 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 KRT33BQ14525 404 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 LCTLQ6UWM7 567 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 ADAMTSL4Q6UY14 1074 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 CCDC81Q6ZN84 652 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 VN1R5Q7Z5H4 357 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 SETD9Q8NE22 299 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 SETD7Q8WTS6 366 aaKnown RBP13.06□□□□□ -0.32
SRSF1-205ENST00000582730 EFHD2Q96C19 240 aaPredicted RBP13.06□□□□□ -0.32
SRSF1-205ENST00000582730 COX14Q96I36 57 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 C12orf66Q96MD2 445 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 NODALQ96S42 347 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 AIF1LQ9BQI0 150 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 DOHHQ9BU89 302 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 XKR8Q9H6D3 395 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 MYNNQ9NPC7 610 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 TAS2R9Q9NYW1 312 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 C2orf16Q68DN1 1984 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 M0QX08 132 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 RPN2P04844 631 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 APODP05090 189 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 MAT2AP31153 395 aaKnown RBP13.06□□□□□ -0.32
SRSF1-205ENST00000582730 PIK3CBP42338 1070 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 ITGA1P56199 1179 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 RPS26P62854 115 aaKnown RBP13.06□□□□□ -0.32
SRSF1-205ENST00000582730 KCNJ10P78508 379 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 PRSS53Q2L4Q9 553 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 AGBL4Q5VU57 503 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 THOC7Q6I9Y2 204 aaKnown RBP13.06□□□□□ -0.32
SRSF1-205ENST00000582730 FAM71E1Q6IPT2 247 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 TRIM40Q6P9F5 258 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 MINDY2Q8NBR6 621 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 OR5K2Q8NHB8 316 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 CHST8Q9H2A9 424 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 TRIT1Q9H3H1 467 aaKnown RBP13.06□□□□□ -0.32
SRSF1-205ENST00000582730 TPK1Q9H3S4 243 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 AHSPQ9NZD4 102 aa13.06□□□□□ -0.32
SRSF1-205ENST00000582730 YBX2Q9Y2T7 364 aaKnown RBP13.06□□□□□ -0.32
SRSF1-205ENST00000582730 SLC16A6O15403 523 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 C9P02748 559 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 CLK3P49761 638 aaKnown RBP13.05□□□□□ -0.32
SRSF1-205ENST00000582730 IRF4Q15306 451 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 SF3B4Q15427 424 aaKnown RBP eCLIP13.05□□□□□ -0.323e-7■■■■■ 52.1
SRSF1-205ENST00000582730 C10orf62Q5T681 223 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-205ENST00000582730 LAIR2Q6ISS4 152 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 SLC9B2Q86UD5 537 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 FAM20CQ8IXL6 584 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 OR52N2Q8NGI0 321 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.05□□□□□ -0.32
SRSF1-205ENST00000582730 MUL1Q969V5 352 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 CTRCQ99895 268 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 SPATA9Q9BWV2 254 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 ABCG4Q9H172 646 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 SIRT5Q9NXA8 310 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 ANKMY1Q9P2S6 941 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 RAB23Q9ULC3 237 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 DOCK9Q9BZ29 2069 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 KIAA1549LQ6ZVL6 1849 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 XIRP2A4UGR9 3374 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 RFXAPO00287 272 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 PLPP1O14494 284 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 OR1F1O43749 312 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 SPIBQ01892 262 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 LRRC74AQ0VAA2 488 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 TOP3AQ13472 1001 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-205ENST00000582730 INAQ16352 499 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 KDM4DQ6B0I6 523 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 GPR153Q6NV75 609 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 VMP1Q96GC9 406 aa13.05□□□□□ -0.32
SRSF1-205ENST00000582730 PAK1IP1Q9NWT1 392 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-205ENST00000582730 SEMG1P04279 462 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 ITGAMP11215 1152 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 GP2P55259 537 aaKnown RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 CDH12P55289 794 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 ERVK-21P61565 698 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 CDK6Q00534 326 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 HSPB3Q12988 150 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 RPA4Q13156 261 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 SMN1Q16637 294 aaKnown RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 PLEKHG7Q6ZR37 379 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms