RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	B4GALT2	O60909	372 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	EED	O75530	441 aa	Known RBP	10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	LYPLA1	O75608	230 aa	Predicted RBP	10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	CHEK2	O96017	543 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	CHN1	P15882	459 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	JAK1	P23458	1154 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	MMP11	P24347	488 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	GRK2	P25098	689 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	SLC1A6	P48664	564 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	EFNA3	P52797	238 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	LIM2	P55344	173 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	ABCE1	P61221	599 aa	Known RBP	10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	SLAMF1	Q13291	335 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	ATP1A4	Q13733	1029 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	IMPG1	Q17R60	797 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	TUBB8	Q3ZCM7	444 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	KANK2	Q63ZY3	851 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	CYP20A1	Q6UW02	462 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	ATG14	Q6ZNE5	492 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	PAGE2	Q7Z2X7	111 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	MRGPRE	Q86SM8	312 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	METTL4	Q8N3J2	472 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	EFCAB3	Q8N7B9	438 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	GBP7	Q8N8V2	638 aa	Predicted RBP	10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	FAM47B	Q8NA70	645 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	ADAMTS18	Q8TE60	1221 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	THAP4	Q8WY91	577 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	CATSPER2	Q96P56	530 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	MAPKAP1	Q9BPZ7	522 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	ACPT	Q9BZG2	426 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	VN1R1	Q9GZP7	353 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	DDX31	Q9H8H2	851 aa	Known RBP	10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	LYRM4	Q9HD34	91 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	LANCL2	Q9NS86	450 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	AHSP	Q9NZD4	102 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	KCMF1	Q9P0J7	381 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	FBXW2	Q9UKT8	454 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	HS3ST3B1	Q9Y662	390 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845	SPACA6	W5XKT8	324 aa		10.9	□□□□□ -0.66
ATP2A3-208	ENST00000570845		A0A0A6YYD5	115 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ARHGAP10	A1A4S6	786 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SERTM1	A2A2V5	107 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ARGFX	A6NJG6	315 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PEX12	O00623	359 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SOCS6	O14544	535 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TMPRSS11D	O60235	418 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ALOX12B	O75342	701 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	GBA	P04062	536 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CYC1	P08574	325 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	C8orf89	P0DMQ9	161 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ACPP	P15309	386 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CPN2	P22792	545 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	HNRNPH2	P55795	449 aa	Known RBP	10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PPP2R2A	P63151	447 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	HMGCS1	Q01581	520 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RHAG	Q02094	409 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	BTK	Q06187	659 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TBL3	Q12788	808 aa	Known RBP	10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	STX3	Q13277	289 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	COMMD6	Q7Z4G1	85 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CLYBL	Q8N0X4	340 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	C1orf52	Q8N6N3	182 aa	Known RBP	10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	METTL21A	Q8WXB1	218 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	C8orf44	Q96CB5	159 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	IP6K3	Q96PC2	410 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CSF3R	Q99062	836 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MESP1	Q9BRJ9	268 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	LYAR	Q9NX58	379 aa	Known RBP	10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	P4HTM	Q9NXG6	502 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ZDHHC2	Q9UIJ5	367 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PHF11	Q9UIL8	331 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MRPS33	Q9Y291	106 aa	Known RBP	10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TRAF6	Q9Y4K3	522 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	DNAJC15	Q9Y5T4	150 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PTGDR2	Q9Y5Y4	395 aa		10.89	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CYR61	O00622	381 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PCDH17	O14917	1159 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PRMT3	O60678	531 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SNUPN	O95149	360 aa	Known RBP	10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ITGB2	P05107	769 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	KLK1	P06870	262 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	FGF4	P08620	206 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	FAM58BP	P0C7Q3	252 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MAOA	P21397	527 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TPP2	P29144	1249 aa	Predicted RBP	10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	HNRNPF	P52597	415 aa	Known RBP	10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	BTG2	P78543	158 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	EEF1A2	Q05639	463 aa	Known RBP	10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ACSM2A	Q08AH3	577 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	BST1	Q10588	318 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CHAF1B	Q13112	559 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TBR1	Q16650	682 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SPIN4	Q56A73	249 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SPDYA	Q5MJ70	313 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CCNYL2	Q5T2Q4	361 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CPZ	Q66K79	652 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ACSM2B	Q68CK6	577 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	BORA	Q6PGQ7	559 aa		10.88	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms