RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 HMCESQ96FZ2 354 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 MAGED4Q96JG8 741 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 RPGRIP1Q96KN7 1286 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 AGPAT1Q99943 283 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 TUBA1CQ9BQE3 449 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 RAB33BQ9H082 229 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 TMEM117Q9H0C3 514 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 VPS33BQ9H267 617 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 GANQ9H2C0 597 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 TFB2MQ9H5Q4 396 aaKnown RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 EGLN3Q9H6Z9 239 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SLC52A3Q9NQ40 469 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 HPS4Q9NQG7 708 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 PLEK2Q9NYT0 353 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 ATXN10Q9UBB4 475 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 EXTL2Q9UBQ6 330 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 TEKT2Q9UIF3 430 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 FBXL4Q9UKA2 621 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 MRTO4Q9UKD2 239 aaKnown RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SNX6Q9UNH7 406 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SATB2Q9UPW6 733 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 OR1A2Q9Y585 309 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 ANGPTL3Q9Y5C1 460 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 DISP3Q9P2K9 1392 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 RB1CC1Q8TDY2 1594 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 TRBV4-1A0A0J9YWV2 114 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TRIM49BA6NDI0 452 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 SERINC4A6NH21 518 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CD8B2A6NJW9 211 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 EPHB6O15197 1021 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 B4GAT1O43505 415 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 KRT86O43790 486 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 ECE2O60344 883 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CSO75390 466 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TOM1L1O75674 476 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 IDH1O75874 414 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 DFFBO76075 338 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 KIAA0754O94854 1291 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 KRT8P05787 483 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CA3P07451 260 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 HMBSP08397 361 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 FRMD6-AS1P0C7T7 363 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 RRASP10301 218 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 LIFP15018 202 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 FCARP24071 287 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 IL4RP24394 825 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 ITGA3P26006 1051 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 PBLDP30039 288 aaPredicted RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 OR1D5P58170 312 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 IRX3P78415 501 aaPredicted RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 GABPAQ06546 454 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 KIF5AQ12840 1032 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CHIT1Q13231 466 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 SNTB2Q13425 540 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 KRT81Q14533 505 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 EXOSC7Q15024 291 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 ADPRMQ3LIE5 342 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 NADK2Q4G0N4 442 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TMEM41BQ5BJD5 291 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 FGD3Q5JSP0 725 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 C11orf87Q6NUJ2 197 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 SYCE2Q6PIF2 218 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CES3Q6UWW8 571 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TMEM207Q6UWW9 146 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CDHR3Q6ZTQ4 885 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CYP4V2Q6ZWL3 525 aaPredicted RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 G2E3Q7L622 706 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TRMT11Q7Z4G4 463 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 YRDCQ86U90 279 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 PIGZQ86VD9 579 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CENPLQ8N0S6 344 aaPredicted RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 GPC2Q8N158 579 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TEX26Q8N6G2 289 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 FADS6Q8N9I5 356 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 ADAD2Q8NCV1 583 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 OR52M1Q8NGK5 317 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 OR10T2Q8NGX3 314 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 U2AF1L4Q8WU68 220 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 GIMAP1Q8WWP7 306 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 SORCS1Q8WY21 1168 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CTNNBL1Q8WYA6 563 aaPredicted RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 SMPDL3AQ92484 453 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 MCHR2Q969V1 340 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TMEM143Q96AN5 459 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TMEM45BQ96B21 275 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 SCRN2Q96FV2 425 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 THOC3Q96J01 351 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 ST6GAL2Q96JF0 529 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 TTC25Q96NG3 672 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 IL17FQ96PD4 163 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 S1PR3Q99500 378 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 JPH2Q9BR39 696 aaPredicted RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 CBWD1Q9BRT8 395 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 NACA2Q9H009 215 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 THAP2Q9H0W7 228 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 GTSE1Q9NYZ3 720 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 VPS54Q9P1Q0 977 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 ZNF319Q9P2F9 582 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 POLKQ9UBT6 870 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 DBF4Q9UBU7 674 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms