RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MCM8Q9UJA3 840 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 CROTQ9UKG9 612 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 DAPP1Q9UN19 280 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PTRH2Q9Y3E5 179 aaKnown RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 PCDHGA6Q9Y5G7 932 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 DMXL1Q9Y485 3027 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 A0A0A6YYD5 115 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 LOC101059948A0A1B0GTJ6 334 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 VSTM2BA6NLU5 285 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 C1QTNF9BB2RNN3 333 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 TLX3O43711 291 aaPredicted RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 PCDH7O60245 1069 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 EDF1O60869 148 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 BMP10O95393 424 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 HEXBP07686 556 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 FHP07954 510 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 ANXA4P09525 319 aaPredicted RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 ZGLP1P0C6A0 271 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 C1QTNF9P0C862 333 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 ACPPP15309 386 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 LBPP18428 481 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 TIA1P31483 386 aaKnown RBP eCLIP7.21□□□□□ -1.26
TDP1-214ENST00000556063 ASMTP46597 345 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 EMP2P54851 167 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 UCNP55089 124 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 LIM2P55344 173 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 RPL38P63173 70 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 OLR1P78380 273 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 MAT1AQ00266 395 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 BIKQ13323 160 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 RUNX2Q13950 521 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 SSPNQ14714 243 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 TGIF1Q15583 401 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 NKG7Q16617 165 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 GALNTL6Q49A17 601 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 MINDY4Q4G0A6 757 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 XKR7Q5GH72 579 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 NOXRED1Q6NXP6 359 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 MRPL14Q6P1L8 145 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 ZNF793Q6ZN11 406 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 Q6ZSR9 355 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 ACAD11Q709F0 780 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 MED25Q71SY5 747 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 COX15Q7KZN9 410 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 RAB43Q86YS6 212 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 ZNF595Q8IYB9 648 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 CA13Q8N1Q1 262 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 DTWD1Q8N5C7 304 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 EFCAB3Q8N7B9 438 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 ENDOVQ8N8Q3 282 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 FNDC5Q8NAU1 212 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 OR5T3Q8NGG3 340 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 OR2Y1Q8NGV0 311 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 METTL21AQ8WXB1 218 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 NACC2Q96BF6 587 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 APIPQ96GX9 242 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 NAF1Q96HR8 494 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 SLC45A3Q96JT2 553 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 IP6K3Q96PC2 410 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 CRB3Q9BUF7 120 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 SORBS1Q9BX66 1292 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 TRIM55Q9BYV6 548 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 NUF2Q9BZD4 464 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 NSRP1Q9H0G5 558 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 TUBB1Q9H4B7 451 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 AKIRIN1Q9H9L7 192 aaPredicted RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 MEAF6Q9HAF1 191 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 SLCO1B3Q9NPD5 702 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 PRDM9Q9NQV7 894 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 PRTFDC1Q9NRG1 225 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 SEMA3GQ9NS98 782 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 SLC22A11Q9NSA0 550 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 CTSFQ9UBX1 484 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 C19orf25Q9UFG5 118 aaPredicted RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 FBXW2Q9UKT8 454 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 PSME2Q9UL46 239 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 TCFL5Q9UL49 500 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 MAPRE3Q9UPY8 281 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 EIF3LQ9Y262 564 aaKnown RBP7.21□□□□□ -1.26
TDP1-214ENST00000556063 MMACHCQ9Y4U1 282 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 CCL27Q9Y4X3 112 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 USH1CQ9Y6N9 552 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 CHD8Q9HCK8 2581 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 PTPRQQ9UMZ3 2332 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 DNAH14Q0VDD8 3507 aa7.21□□□□□ -1.26
TDP1-214ENST00000556063 CNTRLQ7Z7A1 2325 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ATP6AP2A0A1C7CYW4 349 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 C1orf226A1L170 272 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ZNF891A8MT65 544 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 IDSB3KWA1 339 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 C4orf51C9J302 202 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PEX12O00623 359 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 LSM1O15116 133 aaKnown RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 POLR3GO15318 223 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 TMPRSS11DO60235 418 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PRMT3O60678 531 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 DIAPH2O60879 1101 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 B4GALT2O60909 372 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 CTNSO60931 367 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PEX11AO75192 247 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms