RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 COLEC10Q9Y6Z7 277 aa3.6□□□□□ -1.83
LSM6P2-201ENST00000552208 EVPLQ92817 2033 aa3.6□□□□□ -1.83
LSM6P2-201ENST00000552208 FAM230AA0A1W2PPH8 454 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 MSGN1A6NI15 193 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ARPC1BO15143 372 aaKnown RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 CSO75390 466 aaKnown RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 VPS26AO75436 327 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 CSDE1O75534 798 aaKnown RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 PRAMEF12O95522 483 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 PAK4O96013 591 aaPredicted RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 OPN1MWP04001 364 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 VTNP04004 478 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 GSTA2P09210 222 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 OPN1MW2P0DN77 364 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 OPN1MW3P0DN78 364 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 RALAP11233 206 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 GNSP15586 552 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 GLRA1P23415 457 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 CEACAM8P31997 349 aaPredicted RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 PRDX2P32119 198 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ACTR1AP61163 376 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 MYBPC1Q00872 1141 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 HSF2Q03933 536 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 LRRC74AQ0VAA2 488 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 HSPA14Q0VDF9 509 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 CNTN1Q12860 1018 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 RFTN1Q14699 578 aaPredicted RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 EXOSC7Q15024 291 aaKnown RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 OR1C1Q15619 314 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 DUSP5Q16690 384 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 GPAT3Q53EU6 434 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 MPPE1Q53F39 396 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 C9orf50Q5SZB4 431 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 LYPLAL1Q5VWZ2 237 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 C9orf57Q5W0N0 161 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 HIST2H2AA3Q6FI13 130 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 SULT1C3Q6IMI6 304 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 CAPN13Q6MZZ7 669 aaPredicted RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 CASC1Q6TDU7 716 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 TMEM207Q6UWW9 146 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 TMEM64Q6YI46 380 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 FOXL2NBQ6ZUU3 175 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 FCRLAQ7L513 359 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ISCA2Q86U28 154 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 SPATA2LQ8IUW3 424 aaPredicted RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 MARVELD2Q8N4S9 558 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 FADS6Q8N9I5 356 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 OR6M1Q8NGM8 313 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 OR13C5Q8NGS8 318 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 OR4C3Q8NH37 302 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 THRSPQ92748 146 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 TMEM45BQ96B21 275 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF479Q96JC4 524 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ERGIC2Q96RQ1 377 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 IWS1Q96ST2 819 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 LPAR4Q99677 370 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 SLC26A1Q9H2B4 701 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 MTIF3Q9H2K0 278 aaKnown RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 VAT1LQ9HCJ6 419 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 PALMDQ9NP74 551 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 HPS4Q9NQG7 708 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ECHDC1Q9NTX5 307 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 RNF186Q9NXI6 227 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 PLEK2Q9NYT0 353 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF319Q9P2F9 582 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 C19orf25Q9UFG5 118 aaPredicted RBP3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ATG4BQ9Y4P1 393 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 OR1A2Q9Y585 309 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 ABCC4O15439 1325 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 NEDD4P46934 1319 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 TTC3P53804 2025 aa3.59□□□□□ -1.83
LSM6P2-201ENST00000552208 CUX2O14529 1486 aa3.59□□□□□ -1.84
LSM6P2-201ENST00000552208 FGD5Q6ZNL6 1462 aa3.59□□□□□ -1.84
LSM6P2-201ENST00000552208 A0A087WUV0 522 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 A0A087WZ39 114 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 TRBV4-1A0A0J9YWV2 114 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 H0YCG3 227 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 PDXKO00764 312 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 TLX2O43763 284 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 CYTIPO60759 359 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF821O75541 412 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 TOM1L1O75674 476 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 PALMO75781 387 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 IDH1O75874 414 aaKnown RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 NGFP01138 241 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 PCCBP05166 539 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 HIST1H2AGP0C0S8 130 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 PRG2P13727 222 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 PAX1P15863 534 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 HLA-FP30511 346 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 FCGR2BP31994 310 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ADRA1AP35348 466 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 SLC1A3P43003 542 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ALDH3B1P43353 468 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 GBX2P52951 348 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 LIMK2P53671 638 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 GEMP55040 296 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 DCDC1P59894 354 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 NANOS3P60323 173 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms