RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PRKNO60260 465 aaPredicted RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 KLHL41O60662 606 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 LDB3O75112 727 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 SEMA7AO75326 666 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 VPS4BO75351 444 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 EEDO75530 441 aaKnown RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 MYO1DO94832 1006 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 CBX6O95503 412 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 GBAP04062 536 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 UQCRHP07919 91 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 RBP1P09455 135 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 PYGBP11216 843 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 COL6A2P12110 1019 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 CNTFP26441 200 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 GSTM2P28161 218 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 TSFMP43897 325 aaKnown RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 SLCO1A2P46721 670 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 HNRNPH2P55795 449 aaKnown RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 SKP1P63208 163 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 PMP22Q01453 160 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 TLR1Q15399 786 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 HIST2H2ACQ16777 129 aaPredicted RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 DEPDC1Q5TB30 811 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 ABHD17BQ5VST6 288 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 HIST2H2AA3Q6FI13 130 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 NIPAL1Q6NVV3 410 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 C16orf47Q6ZP98 133 aaPredicted RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 TAOK1Q7L7X3 1001 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 ATCAYQ86WG3 371 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF227Q86WZ6 799 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 OR4N5Q8IXE1 308 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF321PQ8N8H1 164 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 L3MBTL4Q8NA19 623 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 WDR20Q8TBZ3 569 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 M1APQ8TC57 530 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 ELP5Q8TE02 316 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 THAP3Q8WTV1 239 aaPredicted RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 HAS2Q92819 552 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 ANKRD9Q96BM1 317 aaPredicted RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 SIGLEC12Q96PQ1 595 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 MRPL57Q9BQC6 102 aaKnown RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 NPLQ9BXD5 320 aaPredicted RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 CDCP1Q9H5V8 836 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 COPS7BQ9H9Q2 264 aaPredicted RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 CLK4Q9HAZ1 481 aaKnown RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 PRM3Q9NNZ6 103 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 FARSBQ9NSD9 589 aaKnown RBP9.15□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF225Q9UK10 706 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 FBXW2Q9UKT8 454 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 EMCNQ9ULC0 261 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 VPS4AQ9UN37 437 aa9.15□□□□□ -0.94
HDAC7-229ENST00000549883 ICE1Q9Y2F5 2266 aa9.15□□□□□ -0.95
HDAC7-229ENST00000549883 PRRC2CQ9Y520 2896 aaKnown RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 CROCCQ5TZA2 2017 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 POLEQ07864 2286 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 TRBV11-1A0A0K0K1C0 115 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 A0A1W2PS29 197 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 ARHGAP10A1A4S6 786 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 CCDC189A1A4V9 331 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 DYTNA2CJ06 578 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 OR5H15A6NDH6 313 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SAGE2PA6NJ88 616 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SMIM23A6NLE4 172 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 H0YIV9 168 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 STX16-NPEPL1H3BU86 382 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 STX16O14662 325 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 TMPRSS11DO60235 418 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 DLX3O60479 287 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SMIM24O75264 130 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SCELO95171 688 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 CLDN9O95484 217 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 RPS17P08708 135 aaKnown RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 ICAM2P13598 275 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 HIST1H1TP22492 207 aaPredicted RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 BSGP35613 385 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 CD96P40200 585 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SSR2P43308 183 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 GPR143P51810 404 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SLC13A2Q13183 592 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SLAMF1Q13291 335 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 TUBA3CQ13748 450 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 UBAP2LQ14157 1087 aaKnown RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 EXT1Q16394 746 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 TSNAXIP1Q2TAA8 658 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 AP5B1Q2VPB7 878 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 UNC50Q53HI1 259 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SGO1Q5FBB7 561 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 TCHHL1Q5QJ38 904 aaPredicted RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 LIPJQ5W064 366 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 C18orf63Q68DL7 685 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 OR4C11Q6IEV9 310 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 LETMD1Q6P1Q0 360 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 TUBA3EQ6PEY2 450 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 DGAT2L6Q6ZPD8 337 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 SH2D5Q6ZV89 423 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 CHSY3Q70JA7 882 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 APCDD1LQ8NCL9 501 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 OR4F6Q8NGB9 312 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 OR2W6PQ8NHA6 318 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 PRR7Q8TB68 274 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms