RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 BTRCQ9Y297 605 aa4.03□□□□□ -1.76
CBX5-203ENST00000547872 PAM16Q9Y3D7 125 aa4.03□□□□□ -1.76
CBX5-203ENST00000547872 TMEM184BQ9Y519 407 aaPredicted RBP4.03□□□□□ -1.76
CBX5-203ENST00000547872 TRPM6Q9BX84 2022 aa4.03□□□□□ -1.76
CBX5-203ENST00000547872 NF1P21359 2839 aa4.03□□□□□ -1.76
CBX5-203ENST00000547872 POLQO75417 2590 aa4.03□□□□□ -1.77
CBX5-203ENST00000547872 ITPR2Q14571 2701 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TEX22C9J3V5 150 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 CCL21O00585 134 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TSPAN4O14817 238 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 SOX30O94993 753 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 NR3C1P04150 777 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 RPN1P04843 607 aaKnown RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 FYNP06241 537 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 PYGLP06737 847 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 CCNB1P14635 433 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 CD1EP15812 388 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 KLK2P20151 261 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 MYF6P23409 242 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 C21orf33P30042 268 aaPredicted RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 CCR1P32246 355 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TTKP33981 857 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 ARF5P84085 180 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 GALNT2Q10471 571 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TRA2AQ13595 282 aaKnown RBP eCLIP4.02□□□□□ -1.77
CBX5-203ENST00000547872 TAF11Q15544 211 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 CEBPEQ15744 281 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 KNOP1Q1ED39 458 aaKnown RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 ZNF805Q5CZA5 627 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 ZNF766Q5HY98 468 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 SERTAD4-AS1Q5TG53 156 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TMEM198Q66K66 360 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 ARHGAP17Q68EM7 881 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TYW3Q6IPR3 259 aaKnown RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 TMEM270Q6UE05 265 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 GDPD4Q6W3E5 623 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 CENPQQ7L2Z9 268 aaPredicted RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 RRM2BQ7LG56 351 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TBC1D26Q86UD7 250 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 DEFB106AQ8N104 65 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 GUF1Q8N442 669 aaKnown RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 DCAF4L2Q8NA75 395 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 ST6GALNAC3Q8NDV1 305 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 GPT2Q8TD30 523 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 GRHL3Q8TE85 626 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 SLC37A2Q8TED4 501 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 ITLN2Q8WWU7 325 aaPredicted RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 ARHGEF26Q96DR7 871 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 PHF21BQ96EK2 531 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 MED30Q96HR3 178 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TBATAQ96M53 351 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 LLPHQ9BRT6 129 aaKnown RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 GSDMCQ9BYG8 508 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 WDR26Q9H7D7 661 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 LHX9Q9NQ69 397 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 AGPAT4Q9NRZ5 378 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 SNTG1Q9NSN8 517 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 ANKRD10Q9NXR5 420 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 HCN3Q9P1Z3 774 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 NDRG3Q9UGV2 375 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 FBXO2Q9UK22 296 aaPredicted RBP4.02□□□□□ -1.77
CBX5-203ENST00000547872 SLC13A4Q9UKG4 626 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 SNX7Q9UNH6 387 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 MED13LQ71F56 2210 aa4.02□□□□□ -1.77
CBX5-203ENST00000547872 TLN1Q9Y490 2541 aaKnown RBP4.01□□□□□ -1.77
CBX5-203ENST00000547872 PDZD2O15018 2839 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 IGHV4-28A0A0C4DH34 117 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 GAGE10A6NGK3 116 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 CBY3A6NI87 242 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 O00370 1275 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 E2F3O00716 465 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 KCNN4O15554 427 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 CLDN11O75508 207 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 ZNF821O75541 412 aaPredicted RBP4.01□□□□□ -1.77
CBX5-203ENST00000547872 SPAG6O75602 509 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 SERPINI2O75830 405 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 MTA2O94776 668 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 EML2O95834 649 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 NR2F2P24468 414 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 SSTR2P30874 369 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 FMO4P31512 558 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 GTF2H1P32780 548 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 CA5AP35218 305 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 GGT5P36269 586 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 RPL3P39023 403 aaKnown RBP4.01□□□□□ -1.77
CBX5-203ENST00000547872 GARSP41250 739 aaKnown RBP4.01□□□□□ -1.77
CBX5-203ENST00000547872 SULT1E1P49888 294 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 MXI1P50539 228 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 PLK1P53350 603 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 CDH4P55283 916 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 RHOAP61586 193 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 RPS15P62841 145 aaKnown RBP4.01□□□□□ -1.77
CBX5-203ENST00000547872 KRTAP1-1Q07627 177 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 FOXD4Q12950 439 aaPredicted RBP4.01□□□□□ -1.77
CBX5-203ENST00000547872 CDC16Q13042 620 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 CUL2Q13617 745 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 C1orf220Q5T0J3 134 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 FAAH2Q6GMR7 532 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 RAET1GQ6H3X3 334 aa4.01□□□□□ -1.77
CBX5-203ENST00000547872 RWDD4Q6NW29 188 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms