RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 AENQ8WTP8 325 aaKnown RBP18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 ILKAPQ9H0C8 392 aaPredicted RBP18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 MMP25Q9NPA2 562 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 PRTFDC1Q9NRG1 225 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 LUZP4Q9P127 313 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 TEKT2Q9UIF3 430 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 CNTRLQ7Z7A1 2325 aa18.83■□□□□ 0.61
CACNA2D4-215ENST00000542340 SYNDIG1LA6NDD5 238 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 SMIM23A6NLE4 172 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 GLRA3O75311 464 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 UQCRHP07919 91 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 NUDT17P0C025 328 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 IMPDH1P20839 514 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 SSR2P43308 183 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 CCT5P48643 541 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 NEK2P51955 445 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 RAP1GDS1P52306 607 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 CDH13P55290 713 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 SLC26A5P58743 744 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 ZNF678Q5SXM1 525 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 FRG2Q64ET8 278 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 H3F3CQ6NXT2 135 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 SLC22A9Q8IVM8 553 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 IQCKQ8N0W5 287 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 FAM47BQ8NA70 645 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 TMEM52Q8NDY8 209 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 MYRIPQ8NFW9 859 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 OR4F6Q8NGB9 312 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 HAS2Q92819 552 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 MIB2Q96AX9 1013 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 FRG2BQ96QU4 278 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 SPACA6W5XKT8 324 aa18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 PRRC2CQ9Y520 2896 aaKnown RBP18.83■□□□□ 0.6
CACNA2D4-215ENST00000542340 TENM4Q6N022 2769 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 DYTNA2CJ06 578 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 BLACEA4D250 179 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 FOXO6A8MYZ6 492 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 PLPP1O14494 284 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 CTNSO60931 367 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 HNRNPFP52597 415 aaKnown RBP18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 PRKAA2P54646 552 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 CLCQ05315 142 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 SLC13A2Q13183 592 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 TLR1Q15399 786 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 INPP5JQ15735 1006 aaPredicted RBP18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 IGFBP7Q16270 282 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 UNC50Q53HI1 259 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 ABHD17BQ5VST6 288 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 B3GNTL1Q67FW5 361 aaPredicted RBP18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 TTC19Q6DKK2 380 aaPredicted RBP18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 RPS27LQ71UM5 84 aaKnown RBP18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 ZCCHC7Q8N3Z6 543 aaKnown RBP18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 CPT1CQ8TCG5 803 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 CAVIN3Q969G5 261 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 CSF3RQ99062 836 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 SERPINI1Q99574 410 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 MAPKAP1Q9BPZ7 522 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 KCNK13Q9HB14 408 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 STMN3Q9NZ72 180 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 EMCNQ9ULC0 261 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 GRID1Q9ULK0 1009 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 CLDN16Q9Y5I7 305 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 CSAG2Q9Y5P2 127 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 V9GYY5 206 aaPredicted RBP18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 SCN2AQ99250 2005 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 NBASA2RRP1 2371 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 MYO18BQ8IUG5 2567 aa18.82■□□□□ 0.6
CACNA2D4-215ENST00000542340 SAGE2PA6NJ88 616 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 PPP6CO00743 305 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 SUPT7LO94864 414 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 CRHR1P34998 444 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 ARG2P78540 354 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 KCNC4Q03721 635 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 IFT88Q13099 833 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 SLAMF1Q13291 335 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 TERF2Q15554 542 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 ERCC6LQ2NKX8 1250 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 CUZD1Q86UP6 607 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 RIBC1Q8N443 379 aaPredicted RBP18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 EFCAB3Q8N7B9 438 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 ELP5Q8TE02 316 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 TRPC4APQ8TEL6 797 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 MTFMTQ96DP5 389 aaKnown RBP18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 CCDC126Q96EE4 140 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 L3HYPDHQ96EM0 354 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 ZNF354BQ96LW1 612 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 TMEM237Q96Q45 408 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 SORBS1Q9BX66 1292 aaKnown RBP18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 RNF32Q9H0A6 362 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 MS4A12Q9NXJ0 267 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 PLAAQ9Y263 795 aa18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 UBR5O95071 2799 aaPredicted RBP18.81■□□□□ 0.6
CACNA2D4-215ENST00000542340 A0A1B0GTL3 188 aa18.8■□□□□ 0.6
CACNA2D4-215ENST00000542340 TLDC2A0PJX2 215 aa18.8■□□□□ 0.6
CACNA2D4-215ENST00000542340 A8MUI8 341 aa18.8■□□□□ 0.6
CACNA2D4-215ENST00000542340 SEMA3DO95025 777 aa18.8■□□□□ 0.6
CACNA2D4-215ENST00000542340 ETHE1O95571 254 aa18.8■□□□□ 0.6
CACNA2D4-215ENST00000542340 KRT4P19013 534 aa18.8■□□□□ 0.6
CACNA2D4-215ENST00000542340 TSPAN8P19075 237 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms