RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 GLTPQ9NZD2 209 aa13.1□□□□□ -0.31
NPIPA1-206ENST00000541836 YARS2Q9Y2Z4 477 aaKnown RBP13.1□□□□□ -0.31
NPIPA1-206ENST00000541836 FADS2P1A8MWK0 482 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 SCAMP2O15127 329 aaKnown RBP13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 LGI1O95970 557 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 ATF6P18850 670 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 PPIBP23284 216 aaKnown RBP13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 ACRV1P26436 265 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 AOAHP28039 575 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 SLC9A3P48764 834 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 CDH4P55283 916 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 POU6F2P78424 691 aaPredicted RBP13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 PXDC1Q5TGL8 231 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 USP30Q70CQ3 517 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 PDZD3Q86UT5 571 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 NANOGP1Q8N7R0 232 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 L3MBTL4Q8NA19 623 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 OR4A15Q8NGL6 344 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 MTERF3Q96E29 417 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 QRFPRQ96P65 431 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.09□□□□□ -0.313e-12■■■■■ 43.9
NPIPA1-206ENST00000541836 ATG10Q9H0Y0 220 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 THSD1Q9NS62 852 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 VPS29Q9UBQ0 182 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 PRAMEF33A0A0G2JMD5 474 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 A8MVJ9 347 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 PROM1O43490 865 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 ACSL4O60488 711 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 PRAMEF10O60809 474 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 C1SP09871 688 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 PRKAR1AP10644 381 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 ARSBP15848 533 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 XCR1P46094 333 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 SGSHP51688 502 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 ARF5P84085 180 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 ZNF91Q05481 1191 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 MLLT11Q13015 90 aaPredicted RBP13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 SCARB2Q14108 478 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 NCEH1Q6PIU2 408 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 HSDL2Q6YN16 418 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 C16orf59Q7L2K0 433 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 WDR53Q7Z5U6 358 aaPredicted RBP13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 ZFYVE1Q9HBF4 777 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 GPATCH2Q9NW75 528 aa13.09□□□□□ -0.31
NPIPA1-206ENST00000541836 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 LRRTM2O43300 516 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 LYRM1O43325 122 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 PDGFAP04085 211 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 HIST1H2AGP0C0S8 130 aaPredicted RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 ACADMP11310 421 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 HIST1H2ADP20671 130 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 CD52P31358 61 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 CYP4F8P98187 520 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 HSPA14Q0VDF9 509 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 ZNF177Q13360 481 aaPredicted RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 P2RY14Q15391 338 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 CHRNA6Q15825 494 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 RNF219Q5W0B1 726 aaPredicted RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 DENND1CQ8IV53 801 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 GEMIN6Q8WXD5 167 aaKnown RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 HIST1H2AHQ96KK5 128 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 HIST1H2AJQ99878 128 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 H2AFJQ9BTM1 129 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 TDRD15B5MCY1 1934 aaKnown RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 H3BN98 237 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 HCN1O60741 890 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 PCSK2P16519 638 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 CDH18Q13634 790 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 GRB14Q14449 540 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 NCF4Q15080 339 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 ZBTB37Q5TC79 503 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 MEDAGQ5VYS4 303 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 MFSD14CQ5VZR4 134 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 CNIH2Q6PI25 160 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 MACC1Q6ZN28 852 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 TIGD4Q8IY51 512 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 OR4K1Q8NGD4 311 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 KIAA1143Q96AT1 154 aaPredicted RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 C1GALT1C1Q96EU7 318 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 KCTD7Q96MP8 289 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 SLC6A18Q96N87 628 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 KATNB1Q9BVA0 655 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 ARHGAP39Q9C0H5 1083 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 FZD3Q9NPG1 666 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 PAK6Q9NQU5 681 aaPredicted RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 BTNL2Q9UIR0 455 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 ACSL6Q9UKU0 697 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 RUVBL1Q9Y265 456 aaKnown RBP13.08□□□□□ -0.32
NPIPA1-206ENST00000541836 SPIN1Q9Y657 262 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms