RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 A0A1W2PQY0 241 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 TMEM202A6NGA9 273 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 ENTPD6O75354 484 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 SLC16A8O95907 504 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 RECKO95980 971 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 SLC10A3P09131 477 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 CHI3L1P36222 383 aaPredicted RBP9.24□□□□□ -0.93
CDH13-204ENST00000539548 DDOSTP39656 456 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 MAPK9P45984 424 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 RORCP51449 518 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 DCDC1P59894 354 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 C2orf80Q0P641 193 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 ILKQ13418 452 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 TP53BP2Q13625 1128 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 RAB33AQ14088 237 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 SLC5A12Q1EHB4 618 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 MPEG1Q2M385 716 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 TMEM201Q5SNT2 666 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 RNLSQ5VYX0 342 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 THOC7Q6I9Y2 204 aaKnown RBP9.24□□□□□ -0.93
CDH13-204ENST00000539548 FAM71E1Q6IPT2 247 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 UNC5DQ6UXZ4 953 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 FAM92BQ6ZTR7 304 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 ARMCX6Q7L4S7 300 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 OTOP2Q7RTS6 562 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 TRIM69Q86WT6 500 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 RAB43Q86YS6 212 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 C16orf78Q8WTQ4 265 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 ASB15Q8WXK1 588 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 KLHL6Q8WZ60 621 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 TMEM159Q96B96 161 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 PPCDCQ96CD2 204 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 MTERF3Q96E29 417 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 WDR34Q96EX3 536 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 WDFY2Q96P53 400 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 WRAP53Q9BUR4 548 aaKnown RBP9.24□□□□□ -0.93
CDH13-204ENST00000539548 BARHL1Q9BZE3 327 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 MYNNQ9NPC7 610 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 CFAP97Q9P2B7 532 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 REV1Q9UBZ9 1251 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 MUTYHQ9UIF7 546 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 KCND3Q9UK17 655 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 MAP4K5Q9Y4K4 846 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 NOX1Q9Y5S8 564 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 V9GYH0 126 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 DENND4CQ5VZ89 1909 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 SLC5A10A0PJK1 596 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 OR2AG2A6NM03 316 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 CENPBD1B2RD01 187 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 TLR4O00206 839 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 KLHL18O94889 574 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 SEMA3DO95025 777 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 ADAP00813 363 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 IFNW1P05000 195 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 CYP2A6P11509 494 aaPredicted RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 OSMP13725 252 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 CRYBB2P43320 205 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 BDKRB1P46663 353 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 RFX2P48378 723 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 MC1RQ01726 317 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 GANABQ14697 944 aaKnown RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 SYTL3Q4VX76 610 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 LRRC73Q5JTD7 316 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 NXNL2Q5VZ03 156 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 GDPD4Q6W3E5 623 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 COMMD6Q7Z4G1 85 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 HSD11B1LQ7Z5J1 315 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 RAVER1Q8IY67 606 aaKnown RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 LAS2Q8IYD9 372 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 TCEAL8Q8IYN2 117 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 TRAM1L1Q8N609 369 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 LILRB4Q8NHJ6 448 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 NEIL2Q969S2 332 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 CIDECQ96AQ7 238 aaPredicted RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 TMEM80Q96HE8 168 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 ST6GAL2Q96JF0 529 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 SAMD11Q96NU1 681 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 RC3H2Q9HBD1 1191 aaKnown RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 STARD7Q9NQZ5 370 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 RAB23Q9ULC3 237 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 DOCK6Q96HP0 2047 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 CCDC88CQ9P219 2028 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 ZNF670-ZNF695F2Z2N8 137 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 FFAR1O14842 300 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 SOD2P04179 222 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 TRAPPC2P0DI81 140 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 TRAPPC2BP0DI82 140 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 PSMA1P25786 263 aaKnown RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 ITGB7P26010 798 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 POU1F1P28069 291 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 VIPR1P32241 457 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 SLC7A9P82251 487 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 SREBF2Q12772 1141 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 PUM1Q14671 1186 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDH13-204ENST00000539548 SPHARQ15513 63 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 ARMC4Q5T2S8 1044 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 ZNF648Q5T619 568 aaPredicted RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 C6orf183Q5T699 404 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 TMPRSS11AQ6ZMR5 421 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms