RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 HUS1BQ8NHY5 278 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 SGK2Q9HBY8 427 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 C11orf16Q9NQ32 467 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 SPASTQ9UBP0 616 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 PSORS1C1Q9UIG5 152 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 FZD4Q9ULV1 537 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 ERVW-1Q9UQF0 538 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 PLXNA2O75051 1894 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 MYO7AQ13402 2215 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 H0YIV9 168 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 PCDH17O14917 1159 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 SCAMP2O15127 329 aaKnown RBP12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 FKTNO75072 461 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 SEMA3DO95025 777 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 CAV3P56539 151 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 HOXC5Q00444 222 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 ELP6Q0PNE2 266 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 MESP2Q0VG99 397 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 DBPQ10586 325 aaPredicted RBP12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 IL18R1Q13478 541 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 COX20Q5RI15 118 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 EIF3MQ7L2H7 374 aaKnown RBP12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 WDR53Q7Z5U6 358 aaPredicted RBP12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 TECPR1Q7Z6L1 1165 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 FAM124AQ86V42 546 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 DNAJC22Q8N4W6 341 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 ASCC1Q8N9N2 400 aaKnown RBP12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 OR7G3Q8NG95 312 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 NEIL2Q969S2 332 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 ZSWIM3Q96MP5 696 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 ARPC5LQ9BPX5 153 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 DUSP26Q9BV47 211 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 ASAH2Q9NR71 780 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 TMEM39AQ9NV64 488 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 ZNF226Q9NYT6 803 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 COQ3Q9NZJ6 369 aa12.02□□□□□ -0.48
SFSWAP-208ENST00000539506 RANBP2P49792 3224 aaKnown RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 PCM1Q15154 2024 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CCDC88CQ9P219 2028 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CXorf51AA0A1B0GTR3 108 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 SLC5A10A0PJK1 596 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 KLHL18O94889 574 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CXCL14O95715 111 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CLEC2LP0C7M8 214 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 IDSP22304 550 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 RPS19P39019 145 aaKnown RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 MVDP53602 400 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 UGT2B15P54855 530 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 POLR2LP62875 67 aaKnown RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 ACSM2AQ08AH3 577 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 PRSS53Q2L4Q9 553 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 EXOC3L2Q2M3D2 409 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 ACSM2BQ68CK6 577 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 BRAT1Q6PJG6 821 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 MEX3DQ86XN8 651 aaKnown RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CAMKK1Q8N5S9 505 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CELF5Q8N6W0 485 aaKnown RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 BTN2A2Q8WVV5 523 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 TRMT61AQ96FX7 289 aaKnown RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 SPHK2Q9NRA0 654 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 MOSPD1Q9UJG1 213 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 MAFFQ9ULX9 164 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 LTBP2Q14767 1821 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CLCA1A8K7I4 914 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 E9PQ18 207 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 UGDHO60701 494 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 GPX5O75715 221 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 DNAJB5O75953 348 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 ETFAP13804 333 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 ZNF30P17039 623 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 PBLDP30039 288 aaPredicted RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 DEFA1P59665 94 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 DEFA3P59666 94 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 DCDC1P59894 354 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 ERVFC1P60507 584 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 ZNF658BQ4V348 819 aaPredicted RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 FAM209AQ5JX71 171 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 GRHL2Q6ISB3 625 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 FAM9CQ8IZT9 166 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 TRAM1L1Q8N609 369 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 OR10G2Q8NGC3 310 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CHAC2Q8WUX2 184 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 CHTF18Q8WVB6 975 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 MGLLQ99685 303 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 FAM83CQ9BQN1 747 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 FAM120CQ9NX05 1096 aaKnown RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 RUVBL1Q9Y265 456 aaKnown RBP12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 WNT6Q9Y6F9 365 aa12.02□□□□□ -0.49
SFSWAP-208ENST00000539506 PRAMEF25A6NGN4 478 aa12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 SUV39H1O43463 412 aa12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 TSC22D2O75157 780 aa12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 SNX4O95219 450 aa12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 CDK1P06493 297 aa12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 ANXA4P09525 319 aaPredicted RBP12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 SYN1P17600 705 aa12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 C21orf58P58505 322 aa12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 RPS13P62277 151 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-208ENST00000539506 NTHL1P78549 312 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms