RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PLA2G16P53816 162 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 SLC12A2P55011 1212 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 LIM2P55344 173 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 POU4F1Q01851 419 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 ILF2Q12905 390 aaKnown RBP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 ELAVL1Q15717 326 aaKnown RBP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 PRAMEF9Q5VWM5 478 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 TRIM40Q6P9F5 258 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 ABHD17CQ6PCB6 329 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 C16orf47Q6ZP98 133 aaPredicted RBP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CAPN12Q6ZSI9 719 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CLNKQ7Z7G1 428 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CD163Q86VB7 1156 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 GPALPP1Q8IXQ4 340 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 SPATA6LQ8N4H0 392 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 MARVELD2Q8N4S9 558 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 SDCCAG3Q96C92 435 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 WDR34Q96EX3 536 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 SERINC2Q96SA4 455 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 SPOCK3Q9BQ16 436 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CCDC77Q9BR77 488 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 CAPS2Q9BXY5 557 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 TIMMDC1Q9NPL8 285 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 DNAJC11Q9NVH1 559 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 WWOXQ9NZC7 414 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 KCMF1Q9P0J7 381 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 DAPP1Q9UN19 280 aa11.64□□□□□ -0.55
VAMP1-206ENST00000538970 MTO1Q9Y2Z2 717 aaKnown RBP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 YARS2Q9Y2Z4 477 aaKnown RBP11.64□□□□□ -0.55
VAMP1-206ENST00000538970 SYNDIG1LA6NDD5 238 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 ANKDD1BA6NHY2 528 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 CLGNO14967 610 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 PHGDHO43175 533 aaKnown RBP11.63□□□□□ -0.55
VAMP1-206ENST00000538970 OR2J2O76002 312 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 ZFAND5O76080 213 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 TUBB4AP04350 444 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 CCDC166P0CW27 439 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 CD1DP15813 335 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 CD22P20273 847 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 HSPA7P48741 367 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 MTTPP55157 894 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 DOC2AQ14183 400 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 FBXO48Q5FWF7 155 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 CDKL4Q5MAI5 379 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 MMP21Q8N119 569 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 TMEM132CQ8N3T6 1108 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 PSD4Q8NDX1 1056 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 OR52N2Q8NGI0 321 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 CA5BP1Q8WTZ4 195 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 ESAMQ96AP7 390 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 PTCD3Q96EY7 689 aaKnown RBP11.63□□□□□ -0.55
VAMP1-206ENST00000538970 C14orf79Q96F83 325 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 TSPAN17Q96FV3 270 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 TREX2Q9BQ50 279 aaPredicted RBP11.63□□□□□ -0.55
VAMP1-206ENST00000538970 EFCAB11Q9BUY7 163 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 ENKD1Q9H0I2 346 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 CNOT10Q9H9A5 744 aaKnown RBP11.63□□□□□ -0.55
VAMP1-206ENST00000538970 COPS7BQ9H9Q2 264 aaPredicted RBP11.63□□□□□ -0.55
VAMP1-206ENST00000538970 LIN28AQ9H9Z2 209 aaKnown RBP11.63□□□□□ -0.55
VAMP1-206ENST00000538970 DEPPQ9NTK1 212 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 COQ3Q9NZJ6 369 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 ZNF490Q9ULM2 529 aaPredicted RBP11.63□□□□□ -0.55
VAMP1-206ENST00000538970 ERVK-11Q9UQG0 969 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 SNX24Q9Y343 169 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 HRH3Q9Y5N1 445 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 SAR1BQ9Y6B6 198 aa11.63□□□□□ -0.55
VAMP1-206ENST00000538970 PKDREJQ9NTG1 2253 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 CCDC168Q8NDH2 2452 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 PCNX1Q96RV3 2341 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 PINLYPA6NC86 204 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 A8MVJ9 347 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 CXorf49A8MYA2 514 aaPredicted RBP11.62□□□□□ -0.55
VAMP1-206ENST00000538970 CTNSO60931 367 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 STK16O75716 305 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 OR6B1O95007 311 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 EPORP19235 508 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 SSTR1P30872 391 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 NR0B1P51843 470 aaKnown RBP11.62□□□□□ -0.55
VAMP1-206ENST00000538970 KRTAP10-9P60411 292 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 ATP6V0D1P61421 351 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 GNG11P61952 73 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 BMPR2Q13873 1038 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 RCN2Q14257 317 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 OR4D1Q15615 310 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 ZKSCAN8Q15776 578 aaPredicted RBP11.62□□□□□ -0.55
VAMP1-206ENST00000538970 PDK4Q16654 411 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 XKR6Q5GH73 641 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 SULT1C3Q6IMI6 304 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 ARHGAP11AQ6P4F7 1023 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 SPNS3Q6ZMD2 512 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 GPSM1Q86YR5 675 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 SNX31Q8N9S9 440 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 PDPRQ8NCN5 879 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 OR14A16Q8NHC5 309 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 PTPMT1Q8WUK0 201 aaPredicted RBP11.62□□□□□ -0.55
VAMP1-206ENST00000538970 ASB15Q8WXK1 588 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 F2RL3Q96RI0 385 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 RASL10BQ96S79 203 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 KRT12Q99456 494 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms