RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 WSCD2Q2TBF2 565 aa23.75■■□□□ 1.39
RAB40C-204ENST00000538492 CRB2Q5IJ48 1285 aa23.75■■□□□ 1.39
RAB40C-204ENST00000538492 ADAMTSL4Q6UY14 1074 aa23.75■■□□□ 1.39
RAB40C-204ENST00000538492 CCDC80Q76M96 950 aa23.75■■□□□ 1.39
RAB40C-204ENST00000538492 NLNQ9BYT8 704 aa23.75■■□□□ 1.39
RAB40C-204ENST00000538492 AHSPQ9NZD4 102 aa23.75■■□□□ 1.39
RAB40C-204ENST00000538492 RHCGQ9UBD6 479 aa23.75■■□□□ 1.39
RAB40C-204ENST00000538492 OR1A2Q9Y585 309 aa23.75■■□□□ 1.39
RAB40C-204ENST00000538492 PCDH17O14917 1159 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 GGT2P36268 569 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 DSTNP60981 165 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 RPS26P11Q5JNZ5 115 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-204ENST00000538492 DEPDC1Q5TB30 811 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 TNFAIP8L2Q6P589 184 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-204ENST00000538492 SLC44A2Q8IWA5 706 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-204ENST00000538492 TRUB1Q8WWH5 349 aaKnown RBP23.74■■□□□ 1.39
RAB40C-204ENST00000538492 HDAC8Q9BY41 377 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 CERS4Q9HA82 394 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 THSD1Q9NS62 852 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 SELENONQ9NZV5 590 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 ANGPT4Q9Y264 503 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 KIF26AQ9ULI4 1882 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-204ENST00000538492 C21orf33P30042 268 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-204ENST00000538492 PCBP3P57721 371 aaKnown RBP23.74■■□□□ 1.39
RAB40C-204ENST00000538492 RPA4Q13156 261 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 DUSP7Q16829 419 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 EGFLAMQ63HQ2 1017 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 CEACAM20Q6UY09 585 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 GEMIN6Q8WXD5 167 aaKnown RBP23.74■■□□□ 1.39
RAB40C-204ENST00000538492 PROX1Q92786 737 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 AIF1LQ9BQI0 150 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 COPS4Q9BT78 406 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 TSC22D4Q9Y3Q8 395 aa23.74■■□□□ 1.39
RAB40C-204ENST00000538492 TRBC2A0A5B9 178 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 M0R3G1 203 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 ITGA2P17301 1181 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 DDCP20711 480 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 UQCRC2P22695 453 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 DRD3P35462 400 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 OPRD1P41143 372 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 CLCNKAP51800 687 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 NCS1P62166 190 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 METRNLQ641Q3 311 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 PLD3Q8IV08 490 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 CCDC103Q8IW40 242 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 UTP15Q8TED0 518 aaKnown RBP23.73■■□□□ 1.39
RAB40C-204ENST00000538492 IPCEF1Q8WWN9 437 aaPredicted RBP23.73■■□□□ 1.39
RAB40C-204ENST00000538492 HERVK_113Q902F9 699 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 TM4SF18Q96CE8 201 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 MS4A8Q9BY19 250 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 HEATR5BQ9P2D3 2071 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 M0R129 80 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 SLC22A1O15245 554 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 LATO43561 262 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 ANXA8P13928 327 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 BSGP35613 385 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 NUDT6P53370 316 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 MANFP55145 182 aaKnown RBP23.73■■□□□ 1.39
RAB40C-204ENST00000538492 MVKQ03426 396 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 HSPB3Q12988 150 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.73■■□□□ 1.39
RAB40C-204ENST00000538492 PHOSPHO2Q8TCD6 241 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 RPL3LQ92901 407 aaKnown RBP23.73■■□□□ 1.39
RAB40C-204ENST00000538492 MBNL1Q9NR56 388 aaKnown RBP23.73■■□□□ 1.39
RAB40C-204ENST00000538492 ACER3Q9NUN7 267 aa23.73■■□□□ 1.39
RAB40C-204ENST00000538492 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.73■■□□□ 1.392e-6■■■□□ 15.6
RAB40C-204ENST00000538492 MID1O15344 667 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 IFNA14P01570 189 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 ELOAQ14241 798 aaKnown RBP23.72■■□□□ 1.39
RAB40C-204ENST00000538492 TANGO2Q6ICL3 276 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 BTLAQ7Z6A9 289 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 HORMAD2Q8N7B1 307 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 GTPBP3Q969Y2 492 aaKnown RBP23.72■■□□□ 1.39
RAB40C-204ENST00000538492 PIP5K1AQ99755 562 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 EPS8L2Q9H6S3 715 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 ICKQ9UPZ9 632 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 POFUT2Q9Y2G5 429 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 FAM32AQ9Y421 112 aaKnown RBP23.72■■□□□ 1.39
RAB40C-204ENST00000538492 PCDHGA2Q9Y5H1 932 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 ATG2BQ96BY7 2078 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 ALPK3Q96L96 1907 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 A0A0G2JN53 185 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 ERGP11308 486 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 IDUAP35475 653 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 TGFBR1P36897 503 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 XCR1P46094 333 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 TAS2R38P59533 333 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 TMCO5AQ8N6Q1 288 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 RAB7BQ96AH8 199 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 SH3YL1Q96HL8 342 aaPredicted RBP23.72■■□□□ 1.39
RAB40C-204ENST00000538492 SIGLEC11Q96RL6 698 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 MENTQ9BUN1 341 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 ALOXE3Q9BYJ1 711 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 RHBGQ9H310 441 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 FAIMQ9NVQ4 179 aa23.72■■□□□ 1.39
RAB40C-204ENST00000538492 BCHEP06276 602 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 CA3P07451 260 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 PSMD7P51665 324 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 CCR8P51685 355 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 ITGADQ13349 1161 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms