RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 IQANK1A0A1B0GTG1 560 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 LRRC14BA6NHZ5 514 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 FOXE1O00358 373 aaPredicted RBP13.48□□□□□ -0.25
CTSB-218ENST00000530624 CLDN9O95484 217 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 CBX6O95503 412 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 TGFB1P01137 390 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 UQCRHP07919 91 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
CTSB-218ENST00000530624 PCNAP12004 261 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 ATP5A1P25705 553 aaKnown RBP13.48□□□□□ -0.25
CTSB-218ENST00000530624 PTX3P26022 381 aaPredicted RBP13.48□□□□□ -0.25
CTSB-218ENST00000530624 EEF1DP29692 281 aaKnown RBP13.48□□□□□ -0.25
CTSB-218ENST00000530624 UQCRFS1P47985 274 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 TAS2R50P59544 299 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 PHEXP78562 749 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 ZNF33BQ06732 778 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 SRSF1Q07955 248 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTSB-218ENST00000530624 CUL3Q13618 768 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 CRLF3Q8IUI8 442 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 AMER2Q8N7J2 671 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 ACOT4Q8N9L9 421 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 TMEM52Q8NDY8 209 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 ACMSDQ8TDX5 336 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 NPAS2Q99743 824 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 PLA2G3Q9NZ20 509 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 PCTPQ9UKL6 214 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 SETXQ7Z333 2677 aaKnown RBP13.48□□□□□ -0.25
CTSB-218ENST00000530624 LRRK2Q5S007 2527 aa13.48□□□□□ -0.25
CTSB-218ENST00000530624 A8MUI8 341 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 OR7A17O14581 309 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 CTNSO60931 367 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 SBK3P0C264 359 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 HNRNPFP52597 415 aaKnown RBP13.47□□□□□ -0.25
CTSB-218ENST00000530624 AP5B1Q2VPB7 878 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 GGTA1PQ4G0N0 100 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 OR4C11Q6IEV9 310 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 ZCCHC7Q8N3Z6 543 aaKnown RBP13.47□□□□□ -0.25
CTSB-218ENST00000530624 APCDD1LQ8NCL9 501 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 ST6GALNAC3Q8NDV1 305 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 B3GNT7Q8NFL0 401 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 OR1N1Q8NGS0 311 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 GRHL3Q8TE85 626 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 MZB1Q8WU39 189 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 FAR1Q8WVX9 515 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 RGMAQ96B86 450 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 PHF21BQ96EK2 531 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 SCYL1Q96KG9 808 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 MAGEB10Q96LZ2 347 aaPredicted RBP13.47□□□□□ -0.25
CTSB-218ENST00000530624 CSF3RQ99062 836 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 CENPKQ9BS16 269 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 NOL11Q9H8H0 719 aaKnown RBP13.47□□□□□ -0.25
CTSB-218ENST00000530624 PPCSQ9HAB8 311 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 ZBTB26Q9HCK0 441 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 ADAP2Q9NPF8 381 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 MS4A12Q9NXJ0 267 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 ABI3Q9P2A4 366 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 PSMC3IPQ9P2W1 217 aaPredicted RBP13.47□□□□□ -0.25
CTSB-218ENST00000530624 SPACA6W5XKT8 324 aa13.47□□□□□ -0.25
CTSB-218ENST00000530624 TGFBR3LH3BV60 316 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 PLPP1O14494 284 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 PRAMEF2O60811 474 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 GSTA1P08263 222 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 EDN3P14138 238 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 SSR2P43308 183 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 GPR143P51810 404 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 CCNG1P51959 295 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 TRAF3Q13114 568 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 SLC13A2Q13183 592 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 BIKQ13323 160 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 SERTAD2Q14140 314 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 RASA2Q15283 850 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 NR6A1Q15406 480 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 ELAVL1Q15717 326 aaKnown RBP13.46□□□□□ -0.25
CTSB-218ENST00000530624 ZNF324BQ6AW86 544 aaPredicted RBP13.46□□□□□ -0.25
CTSB-218ENST00000530624 FAM180AQ6UWF9 173 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 CYP4X1Q8N118 509 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 BEST3Q8N1M1 668 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 BCORP1Q8N888 145 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 FAM47BQ8NA70 645 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 MYRIPQ8NFW9 859 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 OR52B6Q8NGF0 335 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 SUN3Q8TAQ9 357 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 ZNF483Q8TF39 744 aaPredicted RBP13.46□□□□□ -0.25
CTSB-218ENST00000530624 MTERF1Q99551 399 aaKnown RBP13.46□□□□□ -0.25
CTSB-218ENST00000530624 SLX1AQ9BQ83 275 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 CCDC77Q9BR77 488 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 ZNF717Q9BY31 904 aaPredicted RBP13.46□□□□□ -0.25
CTSB-218ENST00000530624 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTSB-218ENST00000530624 OR51B5Q9H339 312 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 TRIM45Q9H8W5 580 aaPredicted RBP13.46□□□□□ -0.25
CTSB-218ENST00000530624 MAP10Q9P2G4 905 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 VTI1BQ9UEU0 232 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 RNF11Q9Y3C5 154 aa13.46□□□□□ -0.25
CTSB-218ENST00000530624 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.26
CTSB-218ENST00000530624 CNTRLQ7Z7A1 2325 aa13.46□□□□□ -0.26
CTSB-218ENST00000530624 RP1L1Q8IWN7 2480 aaPredicted RBP13.45□□□□□ -0.26
CTSB-218ENST00000530624 A8MT66 165 aa13.45□□□□□ -0.26
CTSB-218ENST00000530624 RTCAO00442 366 aaKnown RBP13.45□□□□□ -0.26
CTSB-218ENST00000530624 MYO1DO94832 1006 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms