RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 OR1N1Q8NGS0 311 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 HUS1BQ8NHY5 278 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 ACMSDQ8TDX5 336 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 RGMAQ96B86 450 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 PHF21BQ96EK2 531 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 MAGEB10Q96LZ2 347 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 CENPKQ9BS16 269 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 EPB41L4BQ9H329 900 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 ABI3Q9P2A4 366 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 MAP10Q9P2G4 905 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 PPT2Q9UMR5 302 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 PPIEQ9UNP9 301 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 SPACA6W5XKT8 324 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 LRRC14BA6NHZ5 514 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 FOXE1O00358 373 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 OR7A17O14581 309 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 CBX6O95503 412 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 HIST1H1TP22492 207 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 GNLYP22749 145 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 EEF1DP29692 281 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 SLC13A2Q13183 592 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 CUL3Q13618 768 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 CPSF6Q16630 551 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 OR4C11Q6IEV9 310 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 ZNF793Q6ZN11 406 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 MYLK4Q86YV6 388 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 CRLF3Q8IUI8 442 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 CYP4X1Q8N118 509 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 ARMC10Q8N2F6 343 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 FAM26EQ8N5C1 309 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 AMER2Q8N7J2 671 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 SUN3Q8TAQ9 357 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 ATP6V1E2Q96A05 226 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 C1QTNF3Q9BXJ4 246 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 OR51B5Q9H339 312 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 PPCSQ9HAB8 311 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 PRM3Q9NNZ6 103 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 DMRT3Q9NQL9 472 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 MS4A12Q9NXJ0 267 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 PSMC3IPQ9P2W1 217 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 PCTPQ9UKL6 214 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 NTNG1Q9Y2I2 539 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 RNF11Q9Y3C5 154 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 PCDHGB6Q9Y5F9 930 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 CLDN16Q9Y5I7 305 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 TENM4Q6N022 2769 aa11.34□□□□□ -0.59
TRAPPC4-209ENST00000528230 UBR5O95071 2799 aaPredicted RBP11.33□□□□□ -0.59
TRAPPC4-209ENST00000528230 PRAMEF2O60811 474 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 GSTA1P08263 222 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 RPS17P08708 135 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 SBK3P0C264 359 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 TAC1P20366 129 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 UQCRFS1P47985 274 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 CCNG1P51959 295 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 HNRNPFP52597 415 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 SRSF1Q07955 248 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 BIKQ13323 160 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 DDX39BQ13838 428 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 SERTAD2Q14140 314 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 ZRSR2Q15696 482 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 GGTA1PQ4G0N0 100 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 TEX35Q5T0J7 233 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 FHL5Q5TD97 284 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 RPS19BP1Q86WX3 136 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 BEST3Q8N1M1 668 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 ZCCHC7Q8N3Z6 543 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 TMEM52Q8NDY8 209 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 B3GNT7Q8NFL0 401 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 MYRIPQ8NFW9 859 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 WDR20Q8TBZ3 569 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 GRHL3Q8TE85 626 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 FAR1Q8WVX9 515 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 MTERF1Q99551 399 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 NPAS2Q99743 824 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 MAPKAP1Q9BPZ7 522 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 UTP23Q9BRU9 249 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 ZBTB26Q9HCK0 441 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 ADAP2Q9NPF8 381 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 TMEM216Q9P0N5 145 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 VTI1BQ9UEU0 232 aa11.33□□□□□ -0.6
TRAPPC4-209ENST00000528230 ZGRF1Q86YA3 2104 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 A8MUA0 341 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 TGFBR3LH3BV60 316 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 RTCAO00442 366 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 EDN3P14138 238 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 CPN2P22792 545 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 CD96P40200 585 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 SSR2P43308 183 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 CLCN2P51788 898 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 GPR143P51810 404 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 RAP1GDS1P52306 607 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 RPS13P62277 151 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 STX4Q12846 297 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 TRAF3Q13114 568 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 SLAMF1Q13291 335 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 TUBA3CQ13748 450 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 RASA2Q15283 850 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 NR6A1Q15406 480 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms