RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 LRRC19Q9H756 370 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ETNK2Q9NVF9 386 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 THAP10Q9P2Z0 257 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 SLC25A10Q9UBX3 287 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 SUN2Q9UH99 717 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 GGA2Q9UJY4 613 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 VPS28Q9UK41 221 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 FBXO9Q9UK97 447 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 HPCAL4Q9UM19 191 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 NDRG2Q9UN36 371 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 PLA2G4CQ9UP65 541 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 NEU3Q9UQ49 428 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ERVW-1Q9UQF0 538 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 CAMK2AQ9UQM7 478 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 FAM96BQ9Y3D0 163 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 MFHAS1Q9Y4C4 1052 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 STON1Q9Y6Q2 735 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 A0A087X0M5 115 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 A0A1B0GX30 115 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 A0A1W2PS18 150 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CTAGE9A4FU28 777 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PRR23AA6NEV1 266 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ANTXRLA6NF34 631 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ZSCAN5CA6NGD5 496 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 HACD1B0YJ81 288 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 C16orf97H3BN30 126 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SGK1O00141 431 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 DFFAO00273 331 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SOCS6O14544 535 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 MID1O15344 667 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PLRG1O43660 514 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PI15O43692 258 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 MFSD11O43934 449 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 KLK8O60259 260 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PRAMEF11O60813 436 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 TMEM63AO94886 807 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 KLF8O95600 359 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CD160O95971 181 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 MT-CYBP00156 380 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 HEXAP06865 529 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 DCNP07585 359 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 UBL4AP11441 157 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PRLRP16471 622 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 AOC1P19801 751 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CCNCP24863 283 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CASQ1P31415 396 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SERPINB6P35237 376 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CXCL12P48061 93 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 NR2C2P49116 596 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SERPINH1P50454 418 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 DNA2P51530 1060 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CCR9P51686 369 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SEC61BP60468 96 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ST8SIA6P61647 398 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 DYNLT1P63172 113 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ARF5P84085 180 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 GBE1Q04446 702 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF33AQ06730 810 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 IL10RBQ08334 325 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 XRCC4Q13426 336 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ENPP2Q13822 863 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 HNRNPDQ14103 355 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF234Q14588 700 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 RFTN1Q14699 578 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PDK1Q15118 436 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CYTH1Q15438 398 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 DLG2Q15700 870 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 EFNB3Q15768 340 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CTF1Q16619 201 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 TSTQ16762 297 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 GSTA3Q16772 222 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PRICKLE4Q2TBC4 344 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 KRTAP24-1Q3LI83 254 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 FUT11Q495W5 492 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CARD16Q5EG05 197 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 TMEM31Q5JXX7 168 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 NCBP2-AS2Q69YL0 99 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 WDR73Q6P4I2 378 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 LINGO4Q6UY18 593 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 Q6ZS52 159 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 LINGO2Q7L985 606 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 TRMT11Q7Z4G4 463 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PCGF5Q86SE9 256 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 TMPRSS12Q86WS5 348 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SLC13A5Q86YT5 568 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CCDC50Q8IVM0 306 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 C17orf53Q8N3J3 647 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SPEM1Q8N4L4 309 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ALLCQ8N6M5 410 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF441Q8N8Z8 693 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 IL17RCQ8NAC3 791 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 P3H4Q92791 437 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ISG20Q96AZ6 181 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CELF6Q96J87 481 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 KLHL15Q96M94 604 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF599Q96NL3 588 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 ACOX2Q99424 681 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 NAPGQ99747 312 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 GABRG3Q99928 467 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SH3GL2Q99962 352 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms