RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ZNF33BQ06732 778 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 INPP5JQ15735 1006 aaPredicted RBP17.51■□□□□ 0.39
FAM49B-208ENST00000518344 PRR30Q53SZ7 412 aaPredicted RBP17.51■□□□□ 0.39
FAM49B-208ENST00000518344 SGO1Q5FBB7 561 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 ABHD17BQ5VST6 288 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 NUP210LQ5VU65 1888 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 OR4C11Q6IEV9 310 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 CLNKQ7Z7G1 428 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 CUZD1Q86UP6 607 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 TDRPQ86YL5 185 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 ZNF595Q8IYB9 648 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 CATSPER1Q8NEC5 780 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 OR4F6Q8NGB9 312 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 M1APQ8TC57 530 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 ZNF483Q8TF39 744 aaPredicted RBP17.51■□□□□ 0.39
FAM49B-208ENST00000518344 CSF3RQ99062 836 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 MAPKAP1Q9BPZ7 522 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 LYRM4Q9HD34 91 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 MMP25Q9NPA2 562 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 STMN3Q9NZ72 180 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 TEKT2Q9UIF3 430 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 FBXW2Q9UKT8 454 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 SPACA6W5XKT8 324 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 SPTA1P02549 2419 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 IGKV3D-11A0A0A0MRZ8 115 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 CYR61O00622 381 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 PPP6CO00743 305 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 SUPT7LO94864 414 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 OTCP00480 354 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 ATP5F1P24539 256 aaPredicted RBP17.5■□□□□ 0.39
FAM49B-208ENST00000518344 HSD17B7P56937 341 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 SLC26A5P58743 744 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 HERVK_113P63132 956 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 TRAF3Q13114 568 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 SLAMF1Q13291 335 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 FCRLBQ6BAA4 426 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 IQCKQ8N0W5 287 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 CISD2Q8N5K1 135 aaKnown RBP17.5■□□□□ 0.39
FAM49B-208ENST00000518344 OR2W6PQ8NHA6 318 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 WDR20Q8TBZ3 569 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 TRPC4APQ8TEL6 797 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 MIB2Q96AX9 1013 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 C1QTNF3Q9BXJ4 246 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 ERVK-6Q9BXR3 956 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 PNO1Q9NRX1 252 aaKnown RBP17.5■□□□□ 0.39
FAM49B-208ENST00000518344 KCMF1Q9P0J7 381 aa17.5■□□□□ 0.39
FAM49B-208ENST00000518344 SPENQ96T58 3664 aaKnown RBP17.5■□□□□ 0.39
FAM49B-208ENST00000518344 MYOCOSA0A1B0GUC4 107 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 FOXE1O00358 373 aaPredicted RBP17.49■□□□□ 0.39
FAM49B-208ENST00000518344 PLPP1O14494 284 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 CTNSO60931 367 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 GLRA3O75311 464 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 IMPDH1P20839 514 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 CPN2P22792 545 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 CCT5P48643 541 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 CLCQ05315 142 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 IFFO1Q0D2I5 559 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 STX4Q12846 297 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 IFT88Q13099 833 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 ZNF169Q14929 603 aaPredicted RBP17.49■□□□□ 0.39
FAM49B-208ENST00000518344 TLR1Q15399 786 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 ERCC6LQ2NKX8 1250 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 UNC50Q53HI1 259 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 ZNF678Q5SXM1 525 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 FRG2Q64ET8 278 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 WDR93Q6P2C0 686 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 ATCAYQ86WG3 371 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 SLC22A9Q8IVM8 553 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 SCUBE1Q8IWY4 988 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 OR1N1Q8NGS0 311 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 AENQ8WTP8 325 aaKnown RBP17.49■□□□□ 0.39
FAM49B-208ENST00000518344 ZNF354BQ96LW1 612 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 FRG2BQ96QU4 278 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.49■□□□□ 0.396e-11■■■■□ 19.6
FAM49B-208ENST00000518344 ELOVL6Q9H5J4 265 aa17.49■□□□□ 0.39
FAM49B-208ENST00000518344 A0A1B0GTL3 188 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 SAGE2PA6NJ88 616 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 TGFBR3LH3BV60 316 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 CDH16O75309 829 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 VPS4BO75351 444 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 MYO1DO94832 1006 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 SCELO95171 688 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 ZIC2O95409 532 aaPredicted RBP17.48■□□□□ 0.39
FAM49B-208ENST00000518344 ETHE1O95571 254 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 WDPCPO95876 746 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 IFNA16P05015 189 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 TSFMP43897 325 aaKnown RBP17.48■□□□□ 0.39
FAM49B-208ENST00000518344 PRKAA2P54646 552 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 TAS2R50P59544 299 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 CUL3Q13618 768 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 RASA2Q15283 850 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 EMBQ6PCB8 327 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 SH2D5Q6ZV89 423 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 KIF2BQ8N4N8 673 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 HAS2Q92819 552 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 SNRNP40Q96DI7 357 aaKnown RBP17.48■□□□□ 0.39
FAM49B-208ENST00000518344 C19orf60Q96EN9 201 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 TMEM237Q96Q45 408 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 CLMPQ9H6B4 373 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 PSD3Q9NYI0 1048 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms