RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 HAS2Q92819 552 aa16.3■□□□□ 0.2
DDR1-277ENST00000515219 RGMAQ96B86 450 aa16.3■□□□□ 0.2
DDR1-277ENST00000515219 ZNF354BQ96LW1 612 aa16.3■□□□□ 0.2
DDR1-277ENST00000515219 CSF3RQ99062 836 aa16.3■□□□□ 0.2
DDR1-277ENST00000515219 SLC29A3Q9BZD2 475 aa16.3■□□□□ 0.2
DDR1-277ENST00000515219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.3■□□□□ 0.24e-8■■■□□ 16
DDR1-277ENST00000515219 LYRM4Q9HD34 91 aa16.3■□□□□ 0.2
DDR1-277ENST00000515219 TSC22D4Q9Y3Q8 395 aa16.3■□□□□ 0.2
DDR1-277ENST00000515219 SAGE2PA6NJ88 616 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 A8MT66 165 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 CYR61O00622 381 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 SHBGP04278 402 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 SBK3P0C264 359 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 TAC1P20366 129 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 GNLYP22749 145 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 PTX3P26022 381 aaPredicted RBP16.29■□□□□ 0.2
DDR1-277ENST00000515219 TSFMP43897 325 aaKnown RBP16.29■□□□□ 0.2
DDR1-277ENST00000515219 UQCRFS1P47985 274 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 TNFSF10P50591 281 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 TTC19Q6DKK2 380 aaPredicted RBP16.29■□□□□ 0.2
DDR1-277ENST00000515219 OR4C11Q6IEV9 310 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 RPS27LQ71UM5 84 aaKnown RBP16.29■□□□□ 0.2
DDR1-277ENST00000515219 LCA5Q86VQ0 697 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 CRLF3Q8IUI8 442 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 SCUBE1Q8IWY4 988 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 ZNF595Q8IYB9 648 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 CNPY4Q8N129 248 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 TMEM151AQ8N4L1 468 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 ACMSDQ8TDX5 336 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 MAPKAP1Q9BPZ7 522 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 NTMT1Q9BV86 223 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 SORBS1Q9BX66 1292 aaKnown RBP16.29■□□□□ 0.2
DDR1-277ENST00000515219 ANKZF1Q9H8Y5 726 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 ZBTB26Q9HCK0 441 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 SEMA4BQ9NPR2 832 aaPredicted RBP16.29■□□□□ 0.2
DDR1-277ENST00000515219 PNO1Q9NRX1 252 aaKnown RBP16.29■□□□□ 0.2
DDR1-277ENST00000515219 KCMF1Q9P0J7 381 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 SPACA6W5XKT8 324 aa16.29■□□□□ 0.2
DDR1-277ENST00000515219 TENM4Q6N022 2769 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 SMIM23A6NLE4 172 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 TCP11X1B4DZS4 312 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 SCELO95171 688 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 RPS17P08708 135 aaKnown RBP16.28■□□□□ 0.2
DDR1-277ENST00000515219 PYGBP11216 843 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 CPN2P22792 545 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 SLCO1A2P46721 670 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 NEK2P51955 445 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 SLAMF1Q13291 335 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 MEP1AQ16819 746 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 ACER2Q5QJU3 275 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 BEST3Q8N1M1 668 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 KIF2BQ8N4N8 673 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 SLC5A8Q8N695 610 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 SUN3Q8TAQ9 357 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 WDR20Q8TBZ3 569 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 MTFMTQ96DP5 389 aaKnown RBP16.28■□□□□ 0.2
DDR1-277ENST00000515219 RNF32Q9H0A6 362 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 ABI3Q9P2A4 366 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 FBXW2Q9UKT8 454 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 NTNG1Q9Y2I2 539 aa16.28■□□□□ 0.2
DDR1-277ENST00000515219 CNTRLQ7Z7A1 2325 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 TRAV17A0A0B4J275 112 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 A0A1W2PPM1 405 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 OR5H15A6NDH6 313 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 TGFBR3LH3BV60 316 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 PLPP1O14494 284 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 ZNF500O60304 480 aaPredicted RBP16.27■□□□□ 0.2
DDR1-277ENST00000515219 CTNSO60931 367 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 MYO1DO94832 1006 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 GSTA1P08263 222 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 TSPAN8P19075 237 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 PPP2R1BP30154 601 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 CDH13P55290 713 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 STX4Q12846 297 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 TRAF3Q13114 568 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 MILR1Q7Z6M3 343 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 NFAM1Q8NET5 270 aaPredicted RBP16.27■□□□□ 0.2
DDR1-277ENST00000515219 OR4F6Q8NGB9 312 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 ELP5Q8TE02 316 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 ZNF483Q8TF39 744 aaPredicted RBP16.27■□□□□ 0.2
DDR1-277ENST00000515219 MZB1Q8WU39 189 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 CDCP1Q9H5V8 836 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 AGPAT4Q9NRZ5 378 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 CLDN16Q9Y5I7 305 aa16.27■□□□□ 0.2
DDR1-277ENST00000515219 MYOCOSA0A1B0GUC4 107 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 FOXE1O00358 373 aaPredicted RBP16.26■□□□□ 0.19
DDR1-277ENST00000515219 MAN1A2O60476 641 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 LDB3O75112 727 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 SUPT7LO94864 414 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 OTCP00480 354 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 IFNA16P05015 189 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 KRT15P19012 456 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 ST13P50502 369 aaKnown RBP16.26■□□□□ 0.19
DDR1-277ENST00000515219 VSNL1P62760 191 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 HERVK_113P63132 956 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 IFT88Q13099 833 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 CUL3Q13618 768 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 NR6A1Q15406 480 aa16.26■□□□□ 0.19
DDR1-277ENST00000515219 RPUSD3Q6P087 351 aaKnown RBP16.26■□□□□ 0.19
DDR1-277ENST00000515219 B3GNT7Q8NFL0 401 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms