RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 STBD1O95210 358 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 TSHBP01222 138 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 VTNP04004 478 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 EDN1P05305 212 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 FRMD6-AS1P0C7T7 363 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 FAM200BP0CF97 657 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 CT45A8P0DMV1 189 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 CT45A9P0DMV2 189 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 DARSP14868 501 aaKnown RBP3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 ITGA3P26006 1051 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 MARCKSP29966 332 aaPredicted RBP3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 CHRNA3P32297 505 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 ALDH3B1P43353 468 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 SLC6A12P48065 614 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 RGS19P49795 217 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 DNA2P51530 1060 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 CCR4P51679 360 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 HSD17B7P56937 341 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 SLC26A5P58743 744 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 GCNT1Q02742 428 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 SGCGQ13326 291 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 MSLNQ13421 630 aaPredicted RBP3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 GPR50Q13585 617 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 ITGA9Q13797 1035 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 GIT2Q14161 759 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 CT45A2Q5DJT8 189 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 PRAMEF7Q5VXH5 474 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 PLPP4Q5VZY2 271 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 TCEAL6Q6IPX3 200 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 SLC27A4Q6P1M0 643 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 ZCCHC12Q6PEW1 402 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 WDR88Q6ZMY6 472 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 CDHR3Q6ZTQ4 885 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 FCRLAQ7L513 359 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 KIRREL3Q8IZU9 778 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 LRTM2Q8N967 370 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 ZNF383Q8NA42 475 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 SMYD1Q8NB12 490 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 DMBX1Q8NFW5 382 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 OR4A16Q8NH70 328 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 SPATA18Q8TC71 538 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 DQX1Q8TE96 717 aaKnown RBP3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 WBP1Q96G27 269 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 LURAP1Q96LR2 239 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 NODALQ96S42 347 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 LPAR4Q99677 370 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 CCM2Q9BSQ5 444 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 NUSAP1Q9BXS6 441 aaKnown RBP3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 RAB17Q9H0T7 212 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 GANQ9H2C0 597 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 DPEP2Q9H4A9 486 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 ECT2Q9H8V3 914 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 NGBQ9NPG2 151 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 OR6C2Q9NZP2 312 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 EPHA6Q9UF33 1036 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 EXOC7Q9UPT5 735 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 TNNQ9UQP3 1299 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 NCKAP1Q9Y2A7 1128 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 RIPK3Q9Y572 518 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 U3KQV3 271 aa3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 POLR1AO95602 1720 aaPredicted RBP3.05□□□□□ -1.92
CALCOCO2-223ENST00000514267 KDM5CP41229 1560 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 MAST1Q9Y2H9 1570 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 UHRF1BP1LA0JNW5 1464 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 SPATA31E1Q6ZUB1 1445 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 TRAPPC8Q9Y2L5 1435 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 TRIP12Q14669 1992 aaPredicted RBP3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 MTMR11A4FU01 709 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 F8WDY8 70 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 ANGPT2O15123 496 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 ARPC1BO15143 372 aaKnown RBP3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 SLC22A2O15244 555 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 CLDN3O15551 220 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 FGF17O60258 216 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 KIF5CO60282 957 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 SMPD2O60906 423 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 PEX11AO75192 247 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 CAVIN2O95810 425 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 PAK4O96013 591 aaPredicted RBP3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 EPOP01588 193 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 MT-ND2P03891 347 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 ATP1A1P05023 1023 aaKnown RBP3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 APRTP07741 180 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 ADSSP30520 456 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 ALDH1B1P30837 517 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 CEACAM8P31997 349 aaPredicted RBP3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 DCTP40126 519 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 SLC1A3P43003 542 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 KCNK10P57789 538 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 PRKCEQ02156 737 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 KLHL30Q0D2K2 578 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 PDZK1IP1Q13113 114 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 CDH18Q13634 790 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 CEACAM7Q14002 265 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 RBM39Q14498 530 aaKnown RBP3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 WDR43Q15061 677 aaKnown RBP eCLIP3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 TAF1BQ53T94 588 aaPredicted RBP3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 SLC25A53Q5H9E4 307 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 STPG1Q5TH74 334 aa3.04□□□□□ -1.92
CALCOCO2-223ENST00000514267 RAET1GQ6H3X3 334 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms