RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CPPED1Q9BRF8 314 aaPredicted RBP9.85□□□□□ -0.83
TPM3-217ENST00000504663 MMADHCQ9H3L0 296 aaPredicted RBP9.85□□□□□ -0.83
TPM3-217ENST00000504663 LRRN3Q9H3W5 708 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 STARD5Q9NSY2 213 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 FAM120CQ9NX05 1096 aaKnown RBP9.85□□□□□ -0.83
TPM3-217ENST00000504663 SIDT1Q9NXL6 827 aaKnown RBP9.85□□□□□ -0.83
TPM3-217ENST00000504663 AHSPQ9NZD4 102 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 VAPAQ9P0L0 249 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 CUL9Q8IWT3 2517 aa9.85□□□□□ -0.83
TPM3-217ENST00000504663 A0A096LPI6 279 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 IGHV5-10-1A0A0J9YXX1 117 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 A0A1W2PS29 197 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 C1orf226A1L170 272 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 CPED1A4D0V7 1026 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 PRORSD1PA6NEY8 169 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 HYAL3O43820 417 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 GALR3O60755 368 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 RASSF9O75901 435 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 PDE5AO76074 875 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 ZBTB11O95625 1053 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 RPLP0P05388 317 aaKnown RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 FAM58BPP0C7Q3 252 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 COX7A2P14406 83 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 ALOX12P18054 663 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 IL1RNP18510 177 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 NELFEP18615 380 aaKnown RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 EFNA1P20827 205 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 PGM1P36871 562 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 HPCAL1P37235 193 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 KIR3DL1P43629 444 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 GSTM5P46439 218 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 GZMMP51124 257 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 SLC7A2P52569 658 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 MAPK12P53778 367 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 PCBP4P57723 403 aaKnown RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 BTN3A2P78410 334 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 ELF3P78545 371 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 C2orf80Q0P641 193 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 SLC14A1Q13336 389 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 NFYCQ13952 458 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 KCNAB1Q14722 419 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 CEBPEQ15744 281 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 FXNQ16595 210 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 RABL3Q5HYI8 236 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 WASHC2DQ5SRD0 308 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 MANEAQ5SRI9 462 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 C6orf10Q5SRN2 563 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 TMEM71Q6P5X7 295 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 TRIM40Q6P9F5 258 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 C16orf89Q6UX73 402 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 BNC2Q6ZN30 1099 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 PAGE2Q7Z2X7 111 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 ANKRD46Q86W74 232 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 HPS6Q86YV9 775 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 PLXDC1Q8IUK5 500 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 TMEM132CQ8N3T6 1108 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 TMEM52Q8NDY8 209 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 GOT1L1Q8NHS2 421 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 WDR60Q8WVS4 1066 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 NAT6Q93015 286 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 CIDECQ96AQ7 238 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 OR52E6Q96RD3 313 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 CSF3RQ99062 836 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 ZBTB18Q99592 522 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 CGREF1Q99674 301 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 THTPAQ9BU02 230 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 DUSP26Q9BV47 211 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 BHLHE41Q9C0J9 482 aaPredicted RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 KCNH6Q9H252 994 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.84□□□□□ -0.83
TPM3-217ENST00000504663 TAS2R7Q9NYW3 318 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 C5AR2Q9P296 337 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 KLHL3Q9UH77 587 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 BTNL2Q9UIR0 455 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 CROTQ9UKG9 612 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 PRPF19Q9UMS4 504 aaKnown RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 PLCL2Q9UPR0 1127 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 WBP11Q9Y2W2 641 aaKnown RBP9.84□□□□□ -0.83
TPM3-217ENST00000504663 GMEB1Q9Y692 573 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 SLC22A7Q9Y694 548 aa9.84□□□□□ -0.83
TPM3-217ENST00000504663 ZNF860A6NHJ4 632 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 D6RAR5 112 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 RNASET2O00584 256 aaKnown RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 TOX3O15405 576 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 ZSCAN9O15535 394 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 FLRT2O43155 660 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 PROM1O43490 865 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 SRPX2O60687 465 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 B4GALT2O60909 372 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 CPNE6O95741 557 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 FOLR1P15328 257 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 ACP1P24666 158 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 S100A3P33764 101 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 SOX18P35713 384 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 NBL1P41271 181 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 GRK6P43250 576 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 MVDP53602 400 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 LIM2P55344 173 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 OLR1P78380 273 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 TNFRSF17Q02223 184 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms