RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 UQCRFS1P47985 274 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 ARFIP1P53367 373 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 ZNF33BQ06732 778 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 RCN2Q14257 317 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 AP5B1Q2VPB7 878 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 ACER2Q5QJU3 275 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 MYLK4Q86YV6 388 aaPredicted RBP17.5■□□□□ 0.39
RPN1-208ENST00000497415 CYP4X1Q8N118 509 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 RNF175Q8N4F7 328 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 FAM47BQ8NA70 645 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 OR1N1Q8NGS0 311 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 MZB1Q8WU39 189 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.5■□□□□ 0.39
RPN1-208ENST00000497415 REPS1Q96D71 796 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 CSF3RQ99062 836 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 NPAS2Q99743 824 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 C1QTNF3Q9BXJ4 246 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 OR51B5Q9H339 312 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 NOL11Q9H8H0 719 aaKnown RBP17.5■□□□□ 0.39
RPN1-208ENST00000497415 ZBTB26Q9HCK0 441 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 PSMC3IPQ9P2W1 217 aaPredicted RBP17.5■□□□□ 0.39
RPN1-208ENST00000497415 PPT2Q9UMR5 302 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 RNF11Q9Y3C5 154 aa17.5■□□□□ 0.39
RPN1-208ENST00000497415 RELNP78509 3460 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 SYNDIG1LA6NDD5 238 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 OR5H15A6NDH6 313 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 SH3BGRLO75368 114 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 RPS17P08708 135 aaKnown RBP17.49■□□□□ 0.39
RPN1-208ENST00000497415 SRSF1Q07955 248 aaKnown RBP eCLIP17.49■□□□□ 0.39
RPN1-208ENST00000497415 DDX39BQ13838 428 aaKnown RBP17.49■□□□□ 0.39
RPN1-208ENST00000497415 TERF2Q15554 542 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 CPSF6Q16630 551 aaKnown RBP eCLIP17.49■□□□□ 0.39
RPN1-208ENST00000497415 MEP1AQ16819 746 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 OR4C11Q6IEV9 310 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 CRLF3Q8IUI8 442 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 LGI4Q8N135 537 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 OR52B6Q8NGF0 335 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 ACMSDQ8TDX5 336 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 RGMAQ96B86 450 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 NSUN5Q96P11 429 aaKnown RBP17.49■□□□□ 0.39
RPN1-208ENST00000497415 MTERF1Q99551 399 aaKnown RBP17.49■□□□□ 0.39
RPN1-208ENST00000497415 MAPKAP1Q9BPZ7 522 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 CCDC77Q9BR77 488 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 TMEM216Q9P0N5 145 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 MAP10Q9P2G4 905 aa17.49■□□□□ 0.39
RPN1-208ENST00000497415 PPIEQ9UNP9 301 aaKnown RBP17.49■□□□□ 0.39
RPN1-208ENST00000497415 A8MT66 165 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 A8MUA0 341 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 FOXE1O00358 373 aaPredicted RBP17.48■□□□□ 0.39
RPN1-208ENST00000497415 CDK2AP1O14519 115 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 CTNSO60931 367 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 CBX6O95503 412 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 PTX3P26022 381 aaPredicted RBP17.48■□□□□ 0.39
RPN1-208ENST00000497415 CCNG1P51959 295 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 RPS13P62277 151 aaKnown RBP17.48■□□□□ 0.39
RPN1-208ENST00000497415 PHEXP78562 749 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 TRAF3Q13114 568 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 SLC13A2Q13183 592 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 CUL3Q13618 768 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 ZRSR2Q15696 482 aaKnown RBP17.48■□□□□ 0.39
RPN1-208ENST00000497415 FCRLBQ6BAA4 426 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 BEST3Q8N1M1 668 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 KIF2BQ8N4N8 673 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 SLC5A8Q8N695 610 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 ZNF483Q8TF39 744 aaPredicted RBP17.48■□□□□ 0.39
RPN1-208ENST00000497415 ATP6V1E2Q96A05 226 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 MAGEB10Q96LZ2 347 aaPredicted RBP17.48■□□□□ 0.39
RPN1-208ENST00000497415 CDK15Q96Q40 435 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 ANKZF1Q9H8Y5 726 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 AGPAT4Q9NRZ5 378 aa17.48■□□□□ 0.39
RPN1-208ENST00000497415 BLACEA4D250 179 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 SAP18O00422 153 aaKnown RBP17.47■□□□□ 0.39
RPN1-208ENST00000497415 PLPP1O14494 284 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 F10P00742 488 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 SSR2P43308 183 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 TAS2R50P59544 299 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 UBAP2LQ14157 1087 aaKnown RBP17.47■□□□□ 0.39
RPN1-208ENST00000497415 INAQ16352 499 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 GGTA1PQ4G0N0 100 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 ARMC10Q8N2F6 343 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 ZCCHC7Q8N3Z6 543 aaKnown RBP17.47■□□□□ 0.39
RPN1-208ENST00000497415 APCDD1LQ8NCL9 501 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 CENPKQ9BS16 269 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 SORBS1Q9BX66 1292 aaKnown RBP17.47■□□□□ 0.39
RPN1-208ENST00000497415 ZNF717Q9BY31 904 aaPredicted RBP17.47■□□□□ 0.39
RPN1-208ENST00000497415 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPN1-208ENST00000497415 PRM3Q9NNZ6 103 aa17.47■□□□□ 0.39
RPN1-208ENST00000497415 PNO1Q9NRX1 252 aaKnown RBP17.47■□□□□ 0.39
RPN1-208ENST00000497415 ASH1LQ9NR48 2969 aaKnown RBP17.46■□□□□ 0.39
RPN1-208ENST00000497415 MAN1A2O60476 641 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 ETHE1O95571 254 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 SHBGP04278 402 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 GSTA1P08263 222 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 TAC1P20366 129 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 BSGP35613 385 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 GPR143P51810 404 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 NEK2P51955 445 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 RAP1GDS1P52306 607 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 SLAMF1Q13291 335 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 MRPL49Q13405 166 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms