RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FABP3P05413 133 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 FURINP09958 794 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 LAMP1P11279 417 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ATP6V1B1P15313 513 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 JUNBP17275 347 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ITGA2P17301 1181 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 FPR1P21462 350 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CALRP27797 417 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 DNAJA1P31689 397 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 DCTP40126 519 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CDKN2CP42773 168 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 TSFMP43897 325 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CDK9P50750 372 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CCR8P51685 355 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 DGKEP52429 567 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 METAP1P53582 386 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ITGA1P56199 1179 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 TAS2R38P59533 333 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CXCR4P61073 352 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 RPS13P62277 151 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CSNK2BP67870 215 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ABATP80404 500 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CSTF1Q05048 431 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 DMWDQ09019 674 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 SPEM2Q0P670 501 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 LSAMPQ13449 338 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 DDX39BQ13838 428 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 KEAP1Q14145 624 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 NFE2L1Q14494 772 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 STARD3Q14849 445 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 HEPACAMQ14CZ8 416 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 MLC1Q15049 377 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 RGNQ15493 299 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF630Q2M218 657 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 WSCD2Q2TBF2 565 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZBED5Q49AG3 693 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CCSMST1Q4G0I0 132 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 TMEM35AQ53FP2 167 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 EOGTQ5NDL2 527 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 THEMIS2Q5TEJ8 643 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 OR2T5Q6IEZ7 315 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 FAM71E1Q6IPT2 247 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 SDE2Q6IQ49 451 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZCCHC8Q6NZY4 707 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 TSSK4Q6SA08 328 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ENPP6Q6UWR7 440 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF621Q6ZSS3 439 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 USP30Q70CQ3 517 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CCDC80Q76M96 950 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ASCL5Q7RTU5 278 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 WDR5BQ86VZ2 330 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZDHHC21Q8IVQ6 265 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 CHPFQ8IZ52 775 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF786Q8N393 782 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 TBC1D19Q8N5T2 526 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 LILRA3Q8N6C8 439 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 METTL25Q8N6Q8 603 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ARL10Q8N8L6 244 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 OR7A2PQ8NGA2 310 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 OR52N2Q8NGI0 321 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 OR2T29Q8NH02 315 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 NETO1Q8TDF5 533 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 LZICQ8WZA0 190 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF566Q969W8 418 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 SCARF2Q96GP6 870 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF347Q96SE7 839 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 EPYCQ99645 322 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 TBCDQ9BTW9 1192 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 EBPLQ9BY08 206 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 PIF1Q9H611 641 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 MVB12BQ9H7P6 319 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 SLC6A13Q9NSD5 602 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZSCAN32Q9NX65 697 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 TAS2R9Q9NYW1 312 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 RSL24D1Q9UHA3 163 aaKnown RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ENOPH1Q9UHY7 261 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 USP22Q9UPT9 525 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 SLC17A4Q9Y2C5 497 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 COQ6Q9Y2Z9 468 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 PCDHGA2Q9Y5H1 932 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 HEBP2Q9Y5Z4 205 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 VPS13AQ96RL7 3174 aa8.08□□□□□ -1.12
VTI1A-207ENST00000489357 ZFHX2Q9C0A1 2572 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-207ENST00000489357 PRR19A6NJB7 356 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 M0QX08 132 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 TOR1BO14657 336 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 VILLO15195 856 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ADAMDEC1O15204 470 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 PLRG1O43660 514 aaKnown RBP8.07□□□□□ -1.12
VTI1A-207ENST00000489357 GUCY1B2O75343 617 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 CLEC3AO75596 197 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 LRATO95237 230 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ETHE1O95571 254 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 SNAP29O95721 258 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 CPNE6O95741 557 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 IGLV3-19P01714 112 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 CCDC159P0C7I6 412 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 NDUFS1P28331 727 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 CLCNKAP51800 687 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 REEP5Q00765 189 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms