RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SHBQ15464 509 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PLK5Q496M5 336 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 OGFRL1Q5TC84 451 aaPredicted RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 NDUFAF5Q5TEU4 345 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 ARMC6Q6NXE6 501 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 DGLUCYQ7Z3D6 616 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PTOV1Q86YD1 416 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 KBTBD2Q8IY47 623 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 SLC25A45Q8N413 288 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 CAMKVQ8NCB2 501 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PAPD5Q8NDF8 572 aaKnown RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 FAM110BQ8TC76 370 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 NSMCE2Q96MF7 247 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 TRAPPC9Q96Q05 1148 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PKP2Q99959 881 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 COPS7BQ9H9Q2 264 aaPredicted RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PILRBQ9UKJ0 227 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 CORO2BQ9UQ03 480 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 ATG4BQ9Y4P1 393 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 LRRC42Q9Y546 428 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 ADAMTS9Q9P2N4 1935 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 A0A1W2PR48 441 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 A0A1W2PRB8 838 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 H0YGG7 62 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 CXCR6O00574 342 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 KCNK5O95279 499 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 PROS1P07225 676 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 RETP07949 1114 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 UMPSP11172 480 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ST6GAL1P15907 406 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 RXRGP48443 463 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ALDH9A1P49189 494 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 EPHA4P54764 986 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ARF3P61204 181 aaPredicted RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 SLAMF1Q13291 335 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 TRIP10Q15642 601 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ADRM1Q16186 407 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 CYP51A1Q16850 503 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 C6orf132Q5T0Z8 1188 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 PEAR1Q5VY43 1037 aaPredicted RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 LPCAT4Q643R3 524 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 CPZQ66K79 652 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 C1orf210Q8IVY1 113 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ZZZ3Q8IYH5 903 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 C19orf47Q8N9M1 422 aaKnown RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 KLHL6Q8WZ60 621 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 UCN3Q969E3 161 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ELF4Q99607 663 aaPredicted RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 FAIM2Q9BWQ8 316 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 SPATA9Q9BWV2 254 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ACSS1Q9NUB1 689 aaPredicted RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 GPATCH2Q9NW75 528 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 LYARQ9NX58 379 aaKnown RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 C5AR2Q9P296 337 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 PCDHGB4Q9UN71 923 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 RP1P56715 2156 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 PROM1O43490 865 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 HCRTR1O43613 425 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 PEX1O43933 1283 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 GUCY1B2O75343 617 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 AIFM1O95831 613 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 GNSP15586 552 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 CSTF1Q05048 431 aaKnown RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 BNIP3Q12983 259 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 MLC1Q15049 377 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 RGNQ15493 299 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 MANEAQ5SRI9 462 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 HMBOX1Q6NT76 420 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 FAM180BQ6P0A1 224 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ERICH5Q6P6B1 374 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 KANSL1Q7Z3B3 1105 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 CLEC4FQ8N1N0 589 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 TRIML2Q8N7C3 387 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ARL10Q8N8L6 244 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 TMEM105Q8N8V8 129 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 PSMA8Q8TAA3 256 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 PNPT1Q8TCS8 783 aaKnown RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 OR5P2Q8WZ92 322 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 FIG4Q92562 907 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 RERGQ96A58 199 aaPredicted RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 EXOSC8Q96B26 276 aaKnown RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 SLC38A3Q99624 504 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 SLC35A5Q9BS91 424 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 EFHD1Q9BUP0 239 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ROGDIQ9GZN7 287 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 RAB33BQ9H082 229 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 EPS8L2Q9H6S3 715 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 CXorf36Q9H7Y0 433 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 NEUROD4Q9HD90 331 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 FAM60AQ9NP50 221 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 SUSD2Q9UGT4 822 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ANAPC2Q9UJX6 822 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 CES1P1Q9UKY3 287 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 MRPS2Q9Y399 296 aaKnown RBP8.95□□□□□ -0.98
SF3B1-211ENST00000487698 ADAMTS20P59510 1910 aa8.95□□□□□ -0.98
SF3B1-211ENST00000487698 SPTBP11277 2137 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 TMEM221A6NGB7 291 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 URADA6NGE7 173 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 M0R296 226 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms