RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CYR61O00622 381 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 SH3BGRLO75368 114 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 ITGA10O75578 1167 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 S100BP04271 92 aaPredicted RBP22.88■■□□□ 1.25
LIME1-206ENST00000487026 SNRPB2P08579 225 aaKnown RBP22.88■■□□□ 1.25
LIME1-206ENST00000487026 MEOX1P50221 254 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 MTTPP55157 894 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 IRF8Q02556 426 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 CHIT1Q13231 466 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 TERF2Q15554 542 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 GRTP1Q5TC63 336 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 MDGA2Q7Z553 956 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 CHERPQ8IWX8 916 aaKnown RBP22.88■■□□□ 1.25
LIME1-206ENST00000487026 MCEMP1Q8IX19 187 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 ZNF595Q8IYB9 648 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 WDR34Q96EX3 536 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 VMP1Q96GC9 406 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 EFCAB11Q9BUY7 163 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 CD244Q9BZW8 370 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 COPS7BQ9H9Q2 264 aaPredicted RBP22.88■■□□□ 1.25
LIME1-206ENST00000487026 PRM3Q9NNZ6 103 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 DAPP1Q9UN19 280 aa22.88■■□□□ 1.25
LIME1-206ENST00000487026 MRPS33Q9Y291 106 aaKnown RBP22.88■■□□□ 1.25
LIME1-206ENST00000487026 IFNA16P05015 189 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 GSTA2P09210 222 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 ABOP16442 354 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 CASQ1P31415 396 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 PTGER1P34995 402 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 MAGEA4P43358 317 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 SLMAPQ14BN4 828 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 CDSNQ15517 529 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 ZNF630Q2M218 657 aaPredicted RBP22.87■■□□□ 1.25
LIME1-206ENST00000487026 BNC2Q6ZN30 1099 aaPredicted RBP22.87■■□□□ 1.25
LIME1-206ENST00000487026 RAPH1Q70E73 1250 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 FGD2Q7Z6J4 655 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 UBE3DQ7Z6J8 389 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 CYP4Z2PQ8N1L4 340 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 GHDCQ8N2G8 530 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 TMEM156Q8N614 296 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 FBXO25Q8TCJ0 367 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 PPIEQ9UNP9 301 aaKnown RBP22.87■■□□□ 1.25
LIME1-206ENST00000487026 MEMO1Q9Y316 297 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 UTP11Q9Y3A2 253 aaKnown RBP22.87■■□□□ 1.25
LIME1-206ENST00000487026 APCP25054 2843 aa22.87■■□□□ 1.25
LIME1-206ENST00000487026 RTCAO00442 366 aaKnown RBP22.86■■□□□ 1.25
LIME1-206ENST00000487026 PEX1O43933 1283 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 SLC35E2BP0CK96 405 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 TFEBP19484 476 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 TNFRSF8P28908 595 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 HPDP32754 393 aaPredicted RBP22.86■■□□□ 1.25
LIME1-206ENST00000487026 MSH2P43246 934 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 GPR85P60893 370 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 GTF3C1Q12789 2109 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 LAPTM5Q13571 262 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 BMPR2Q13873 1038 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 EFTUD2Q15029 972 aaKnown RBP eCLIP22.86■■□□□ 1.253e-6■■■■□ 26.3
LIME1-206ENST00000487026 HIST2H2ACQ16777 129 aaPredicted RBP22.86■■□□□ 1.25
LIME1-206ENST00000487026 HIST2H2AA3Q6FI13 130 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 XKRXQ6PP77 449 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 ZDHHC24Q6UX98 284 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 C3P1Q6ZMU1 363 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 ZNF793Q6ZN11 406 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 ISCA2Q86U28 154 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 STAG3L4Q8TBR4 150 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 FBF1Q8TES7 1133 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 AGAP11Q8TF27 550 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 PHF12Q96QT6 1004 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 CCDC77Q9BR77 488 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 ADAP2Q9NPF8 381 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 KCMF1Q9P0J7 381 aa22.86■■□□□ 1.25
LIME1-206ENST00000487026 KLF13Q9Y2Y9 288 aaPredicted RBP22.86■■□□□ 1.25
LIME1-206ENST00000487026 TMEM200CA6NKL6 621 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 SUPT3HB4E1H0 165 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 UBXN8O00124 270 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 CTNSO60931 367 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 SUPT3HO75486 399 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 ZFAND5O76080 213 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 SSR4P51571 173 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 SMSP52788 366 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 NAA30Q147X3 362 aaPredicted RBP22.85■■□□□ 1.25
LIME1-206ENST00000487026 PAGE2BQ5JRK9 111 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 DOLPP1Q86YN1 238 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 MAPKAP1Q9BPZ7 522 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 ALOXE3Q9BYJ1 711 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 IGSF5Q9NSI5 407 aa22.85■■□□□ 1.25
LIME1-206ENST00000487026 ENO4A6NNW6 628 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 KLRC4-KLRK1H3BQV0 150 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 OR2J2O76002 312 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 PCNAP12004 261 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 CAV1Q03135 178 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 TGM3Q08188 693 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 STX4Q12846 297 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 ELAVL1Q15717 326 aaKnown RBP22.84■■□□□ 1.25
LIME1-206ENST00000487026 TBCCQ15814 346 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 LRRC70Q7Z2Q7 622 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 TMEM132CQ8N3T6 1108 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 ZNF321PQ8N8H1 164 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 ZNF473Q8WTR7 871 aaKnown RBP22.84■■□□□ 1.25
LIME1-206ENST00000487026 PTPMT1Q8WUK0 201 aaPredicted RBP22.84■■□□□ 1.25
LIME1-206ENST00000487026 MRRFQ96E11 262 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms