RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 OR52E1Q8NGJ3 308 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 PPP1R36Q96LQ0 422 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 TRMOQ9BU70 441 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 WDR12Q9GZL7 423 aaKnown RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 TFB2MQ9H5Q4 396 aaKnown RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 CAB39LQ9H9S4 337 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 CHRAC1Q9NRG0 131 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 FGF21Q9NSA1 209 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 SMPD3Q9NY59 655 aaPredicted RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 ACTR3BQ9P1U1 418 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 POMT2Q9UKY4 750 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 PSME2Q9UL46 239 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 PADI1Q9ULC6 663 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 NDUFAF1Q9Y375 327 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 MRPS18BQ9Y676 258 aaKnown RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 SPTBP11277 2137 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 RNF103-CHMP3A0A140T963 221 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 B8ZZF3 427 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 BTN3A3O00478 584 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 BTN3A1O00481 513 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 KATNA1O75449 491 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 GPC4O75487 556 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 NTRK1P04629 796 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 JUNP05412 331 aaKnown RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 SFTPCP11686 197 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 ITGB6P18564 788 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 TCN2P20062 427 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 F8A1P23610 371 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 GMPRP36959 345 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 GRIA3P42263 894 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 CCR10P46092 362 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 RAB10P61026 200 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 STX1BP61266 288 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 ACVR1Q04771 509 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 CDC20Q12834 499 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 SEMA3AQ14563 771 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 DEFB109BQ30KR1 87 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 PCID2Q5JVF3 399 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 ATP1A1-AS1Q5TC04 95 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 CES3Q6UWW8 571 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 CYP2R1Q6VVX0 501 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 LDB1Q86U70 411 aaPredicted RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 BPHLQ86WA6 291 aaPredicted RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 AMIGO1Q86WK6 493 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 EPHX4Q8IUS5 362 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 CENPLQ8N0S6 344 aaPredicted RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 CARFQ8N187 725 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 SNX31Q8N9S9 440 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 TRPV3Q8NET8 790 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 OR5AR1Q8NGP9 310 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 HMGCLL1Q8TB92 370 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 S100ZQ8WXG8 99 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 TANKQ92844 425 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 MARK4Q96L34 752 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 BCL7BQ9BQE9 202 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 IARS2Q9NSE4 1012 aaKnown RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 CATSPERZQ9NTU4 200 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 INTS10Q9NVR2 710 aaKnown RBP10.26□□□□□ -0.77
DDX56-212ENST00000485367 XPR1Q9UBH6 696 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 ASF1AQ9Y294 204 aa10.26□□□□□ -0.77
DDX56-212ENST00000485367 SAC3D1A6NKF1 404 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 GNAO1P09471 354 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 STMN1P16949 149 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 ATP6V1B2P21281 511 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 PRDX3P30048 256 aaKnown RBP10.25□□□□□ -0.77
DDX56-212ENST00000485367 EIF2B2P49770 351 aaKnown RBP10.25□□□□□ -0.77
DDX56-212ENST00000485367 SLC7A2P52569 658 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 ATP1A4Q13733 1029 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 OGFOD2Q6N063 350 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 SLC15A4Q8N697 577 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 PAPD5Q8NDF8 572 aaKnown RBP10.25□□□□□ -0.77
DDX56-212ENST00000485367 PEX13Q92968 403 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 GPR78Q96P69 363 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 FCRL4Q96PJ5 515 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 KIFC1Q9BW19 673 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 FAM117AQ9C073 453 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 KLHL25Q9H0H3 589 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 HMG20AQ9NP66 347 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 C1GALT1Q9NS00 363 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 MARCH4Q9P2E8 410 aaPredicted RBP10.25□□□□□ -0.77
DDX56-212ENST00000485367 ZNF639Q9UID6 485 aa10.25□□□□□ -0.77
DDX56-212ENST00000485367 SLC5A10A0PJK1 596 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 C2orf74A8MZ97 194 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CLDN25C9JDP6 229 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 FAM47E-STBD1D6RA91 191 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ACOX3O15254 700 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CD3EAPO15446 510 aaKnown RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 SCRG1O75711 98 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ACADLP28330 430 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 NMBRP28336 390 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 OCA2Q04671 838 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 DNASE1L3Q13609 305 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ERV3-1Q14264 604 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 RBM48Q5RL73 367 aaKnown RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 SLC22A9Q8IVM8 553 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 TBC1D21Q8IYX1 336 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ADGRF3Q8IZF5 1079 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CCNYL1Q8N7R7 359 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 TSPEARQ8WU66 669 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CT55Q8WUE5 264 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms