RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 KRTAP10-3P60369 221 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 ABCE1P61221 599 aaKnown RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 DMTNQ08495 405 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC173Q0VFZ6 552 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 ABRQ12979 859 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 MRPL28Q13084 256 aaKnown RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 LCP2Q13094 533 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 RPA4Q13156 261 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 RIGQ13278 110 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 SGCGQ13326 291 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 ITPK1Q13572 414 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 PDE7AQ13946 482 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CEACAM7Q14002 265 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 MEF2DQ14814 521 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 HLA-BQ31612 363 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 FUT11Q495W5 492 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC152Q4G0S7 254 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC122Q5T0U0 273 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 LRRC38Q5VT99 294 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CES4AQ5XG92 561 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 TCEAL6Q6IPX3 200 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 FBXL22Q6P050 247 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 C3P1Q6ZMU1 363 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 GDPGP1Q6ZNW5 385 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CYP4V2Q6ZWL3 525 aaPredicted RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CARM1Q86X55 608 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CACUL1Q86Y37 369 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 OR4N5Q8IXE1 308 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 SLC43A2Q8N370 569 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 RAB42Q8N4Z0 105 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 TMCO5AQ8N6Q1 288 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 C10orf53Q8N6V4 93 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 AQP11Q8NBQ7 271 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 TRPV3Q8NET8 790 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 LPCAT1Q8NF37 534 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 OR5T2Q8NGG2 359 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 OR6S1Q8NH40 331 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 SPATA18Q8TC71 538 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 ATP8B4Q8TF62 1192 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 GIMAP1Q8WWP7 306 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CTNNBL1Q8WYA6 563 aaPredicted RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 SEPT8Q92599 483 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 GTF3AQ92664 365 aaKnown RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 C5orf30Q96GV9 206 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 MAGED4Q96JG8 741 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 PRICKLE1Q96MT3 831 aaPredicted RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 PCDHB18PQ96TA0 734 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 SSX3Q99909 188 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 OPRPNQ99935 248 aaPredicted RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 PKP2Q99959 881 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 DDX50Q9BQ39 737 aaKnown RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 LZTS2Q9BRK4 669 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 FGFBP2Q9BYJ0 223 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 BARHL1Q9BZE3 327 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 NYXQ9GZU5 481 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 FAM49AQ9H0Q0 323 aaPredicted RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CXXC4Q9H2H0 198 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 RWDD1Q9H446 243 aaPredicted RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF665Q9H7R5 613 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 MTHFD2LQ9H903 347 aaPredicted RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 DBNDD1Q9H9R9 158 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 KCNMB3Q9NPA1 279 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 PRMT8Q9NR22 394 aaPredicted RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 PDRG1Q9NUG6 133 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 ZMAT5Q9UDW3 170 aaKnown RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 SLC12A6Q9UHW9 1150 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 CFAP45Q9UL16 551 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 TRAF3IP3Q9Y228 551 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 EXOGQ9Y2C4 368 aaKnown RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF510Q9Y2H8 683 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 MRPL11Q9Y3B7 192 aaKnown RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 RRP15Q9Y3B9 282 aaKnown RBP1.9□□□□□ -2.11
ITGB1-213ENST00000484088 ATP6V0A2Q9Y487 856 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 SNX5Q9Y5X3 404 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 KIF16BQ96L93 1317 aa1.9□□□□□ -2.11
ITGB1-213ENST00000484088 PIK3R4Q99570 1358 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SYNJ2BP-COX16A0A087WUM0 186 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 TRBV5-4A0A0C4DH59 114 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 hCG_38984A0A1B0GV85 526 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SH3PXD2BA1X283 911 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC162PA2VCL2 907 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 FAM149AA5PLN7 773 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 M0R296 226 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SOCS5O75159 536 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CLN5O75503 358 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CPNE6O95741 557 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 FGF19O95750 216 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CGAP01215 116 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 IGHDP01880 384 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SBK2P0C263 348 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 RHOXF2BP0C7M4 288 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF883P0CG24 379 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 KRT13P13646 458 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ATP6V1E1P36543 226 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 LUMP51884 338 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 STARD6P59095 220 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 IRX1P78414 480 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 NUCB2P80303 420 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CYCSP99999 105 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SLC34A1Q06495 639 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms