RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 ANKMY2Q8IV38 441 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 SPATA4Q8NEY3 305 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 SLC13A3Q8WWT9 602 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 PDLIM5Q96HC4 596 aaKnown RBP13.7□□□□□ -0.22
PCCB-212ENST00000474833 HIST1H2AHQ96KK5 128 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 HIST1H2AJQ99878 128 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 H2AFJQ9BTM1 129 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 DEFB126Q9BYW3 111 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 KCMF1Q9P0J7 381 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 WHRNQ9P202 907 aa13.7□□□□□ -0.22
PCCB-212ENST00000474833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.7□□□□□ -0.225e-7■■□□□ 13.3
PCCB-212ENST00000474833 TRBV11-1A0A0K0K1C0 115 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 OR14I1A6ND48 311 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 EIF3HO15372 352 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCCB-212ENST00000474833 B4GALT2O60909 372 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 RAF1P04049 648 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 TUBB4AP04350 444 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 INHBBP09529 407 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 JAK1P23458 1154 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
PCCB-212ENST00000474833 CALCOCO2Q13137 446 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 HERC3Q15034 1050 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 DEFB134Q4QY38 66 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 DUPD1Q68J44 220 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 CAPN13Q6MZZ7 669 aaPredicted RBP13.69□□□□□ -0.22
PCCB-212ENST00000474833 ZNF585AQ6P3V2 769 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 C16orf47Q6ZP98 133 aaPredicted RBP13.69□□□□□ -0.22
PCCB-212ENST00000474833 TAOK1Q7L7X3 1001 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 ZBED8Q8IZ13 594 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 CYP4X1Q8N118 509 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 MFSD9Q8NBP5 474 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 RELL2Q8NC24 303 aaPredicted RBP13.69□□□□□ -0.22
PCCB-212ENST00000474833 PSD4Q8NDX1 1056 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 OR2M7Q8NG81 312 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 OR10Q1Q8NGQ4 319 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 OR56A3Q8NH54 315 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 ATL1Q8WXF7 558 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 NANOS1Q8WY41 292 aaKnown RBP13.69□□□□□ -0.22
PCCB-212ENST00000474833 ANKRD7Q92527 254 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 PTCHD1Q96NR3 888 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 SH3GL2Q99962 352 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 ERP44Q9BS26 406 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 HAUS8Q9BT25 410 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 TRIM54Q9BYV2 358 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 TTTY12Q9BZ98 90 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 PHACTR1Q9C0D0 580 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 NECTIN3Q9NQS3 549 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 ARL15Q9NXU5 204 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 PPIEQ9UNP9 301 aaKnown RBP13.69□□□□□ -0.22
PCCB-212ENST00000474833 SNX24Q9Y343 169 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 PSAT1Q9Y617 370 aa13.69□□□□□ -0.22
PCCB-212ENST00000474833 A0A1B0GVC2 190 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 CTAGE15A4D2H0 777 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 FIGNL2A6NMB9 653 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 BCKDKO14874 412 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 PRKNO60260 465 aaPredicted RBP13.68□□□□□ -0.22
PCCB-212ENST00000474833 CELA3AP09093 270 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 SLC35G6P0C7Q6 338 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 ALOX12P18054 663 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 GPR143P51810 404 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 ETF1P62495 437 aaKnown RBP13.68□□□□□ -0.22
PCCB-212ENST00000474833 NAE1Q13564 534 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 FLYWCH1Q4VC44 716 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 SBSNQ6UWP8 590 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 STRA8Q7Z7C7 330 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 CTAGE6Q86UF2 777 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 TMEM156Q8N614 296 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 ABHD11Q8NFV4 315 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 CREB3L4Q8TEY5 395 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 FBXL8Q96CD0 374 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 MCMBPQ9BTE3 642 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 SARGQ9BW04 601 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 ATG10Q9H0Y0 220 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 RHOJQ9H4E5 214 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 TIMMDC1Q9NPL8 285 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 CLDN16Q9Y5I7 305 aa13.68□□□□□ -0.22
PCCB-212ENST00000474833 FAM95CA0A1B0GW59 222 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 SYT5O00445 386 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 NDUFS4O43181 175 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 RAD51CO43502 376 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 CDH1P12830 882 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 ENDOUP21128 410 aaKnown RBP13.67□□□□□ -0.22
PCCB-212ENST00000474833 CASQ1P31415 396 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 GRK3P35626 688 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 DAZAP2Q15038 168 aaPredicted RBP13.67□□□□□ -0.22
PCCB-212ENST00000474833 PPP1R3AQ16821 1122 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 XKR6Q5GH73 641 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 PAOXQ6QHF9 649 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 SEM1Q6ZVN7 128 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 TRILQ7L0X0 811 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 ZNF572Q7Z3I7 529 aaPredicted RBP13.67□□□□□ -0.22
PCCB-212ENST00000474833 WDR53Q7Z5U6 358 aaPredicted RBP13.67□□□□□ -0.22
PCCB-212ENST00000474833 NKAPQ8N5F7 415 aaKnown RBP13.67□□□□□ -0.22
PCCB-212ENST00000474833 PYROXD1Q8WU10 500 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 CNPPD1Q9BV87 410 aa13.67□□□□□ -0.22
PCCB-212ENST00000474833 REPIN1Q9BWE0 567 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms