RNA–Protein interactions for RNA: ENST00000471145.1

NPHP3-205, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-205ENST00000471145 SDR39U1Q9NRG7 319 aaPredicted RBP4.21□□□□□ -1.74
NPHP3-205ENST00000471145 PHPT1Q9NRX4 125 aaPredicted RBP4.21□□□□□ -1.74
NPHP3-205ENST00000471145 ZDHHC2Q9UIJ5 367 aa4.21□□□□□ -1.74
NPHP3-205ENST00000471145 GMEB2Q9UKD1 530 aa4.21□□□□□ -1.74
NPHP3-205ENST00000471145 CCPG1Q9ULG6 757 aa4.21□□□□□ -1.74
NPHP3-205ENST00000471145 FLNBO75369 2602 aaKnown RBP4.21□□□□□ -1.74
NPHP3-205ENST00000471145 DENND4AQ7Z401 1863 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 MAST4O15021 2626 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 PLIN4Q96Q06 1357 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 LAMA1P25391 3075 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 LOC101059948A0A1B0GTJ6 334 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 DENND3A2RUS2 1198 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 SMIM30A4D0T7 59 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 IFIT3O14879 490 aaKnown RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 ARPC2O15144 300 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 CTDSPLO15194 276 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 STX6O43752 255 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 SNX3O60493 162 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 LUC7L3O95232 432 aaKnown RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 GH1P01241 217 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 CRYAAP02489 173 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 SP9P0CG40 484 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 CALML3P27482 149 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 TIA1P31483 386 aaKnown RBP eCLIP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 MFAP3P55082 362 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 GAGE5Q13069 117 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 GAGE6Q13070 117 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 DMP1Q13316 513 aaPredicted RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 TYSND1Q2T9J0 566 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 BTNL8Q6UX41 500 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 PIGWQ7Z7B1 504 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 EXOC3L1Q86VI1 746 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 NUDT13Q86X67 352 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 RYBPQ8N488 228 aaPredicted RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 METTL27Q8N6F8 245 aaPredicted RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 NAT8LQ8N9F0 302 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 MSANTD4Q8NCY6 345 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 TMEM143Q96AN5 459 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 HNRNPABQ99729 332 aaKnown RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 API5Q9BZZ5 524 aaKnown RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 TMEM206Q9H813 350 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 ZBTB20Q9HC78 741 aaPredicted RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 GSN-AS1Q9NRJ2 163 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 ZFP57Q9NU63 452 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 CNIH4Q9P003 139 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 MTRRQ9UBK8 725 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 CDH7Q9ULB5 785 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 STUB1Q9UNE7 303 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 HBS1LQ9Y450 684 aaKnown RBP4.2□□□□□ -1.74
NPHP3-205ENST00000471145 SNX5Q9Y5X3 404 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 MYH7P12883 1935 aa4.2□□□□□ -1.74
NPHP3-205ENST00000471145 AKAP13Q12802 2813 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 IGLV9-49A0A0B4J1Y8 123 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 TRIM64A6NGJ6 449 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 TRIM64BA6NI03 449 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 PRSS46E5RG02 174 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ZNF263O14978 683 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 PRKNO60260 465 aaPredicted RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 CIDEAO60543 219 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 PRDM1O75626 825 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 SURF6O75683 361 aaKnown RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 PIGNO95427 931 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 TSHBP01222 138 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 HOXB8P17481 243 aaPredicted RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 SOAT1P35610 550 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 SLC1A4P43007 532 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 RPL21P46778 160 aaKnown RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 GAS1P54826 345 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 CLDN15P56746 228 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ERVFC1-1P60608 527 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 RPS6P62753 249 aaKnown RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ARL16Q0P5N6 197 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ILF2Q12905 390 aaKnown RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ILF3Q12906 894 aaKnown RBP eCLIP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 SBK1Q52WX2 424 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 SLC25A53Q5H9E4 307 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 TECRLQ5HYJ1 363 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 WDR38Q5JTN6 314 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 CASC4Q6P4E1 433 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ZNF449Q6P9G9 518 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 PODNL1Q6PEZ8 512 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 PRSS55Q6UWB4 352 aaPredicted RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 LINC00696Q6ZRV3 163 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 PPTC7Q8NI37 304 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 MGARPQ8TDB4 240 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 PHLDA1Q8WV24 401 aaPredicted RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 KRT35Q92764 455 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ATP6V0A1Q93050 837 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 NECTIN4Q96NY8 510 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 TRMT61BQ9BVS5 477 aaKnown RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 FAM207AQ9NSI2 230 aaPredicted RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ABCB8Q9NUT2 735 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 ISY1Q9ULR0 285 aaKnown RBP4.19□□□□□ -1.74
NPHP3-205ENST00000471145 DUSP12Q9UNI6 340 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 TNNQ9UQP3 1299 aa4.19□□□□□ -1.74
NPHP3-205ENST00000471145 FREM2Q5SZK8 3169 aa4.18□□□□□ -1.74
NPHP3-205ENST00000471145 TRAV24A0A0B4J272 114 aa4.18□□□□□ -1.74
NPHP3-205ENST00000471145 OOEPA6NGQ2 149 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms