RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PSMD10O75832 226 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SCO1O75880 301 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 KRT33AO76009 404 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 PRAMEF1O95521 474 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 FADS2O95864 444 aaKnown RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CALCAP01258 141 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 IFNGP01579 166 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 MT-ND1P03886 318 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 HEXAP06865 529 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CHRNGP07510 517 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 HBQ1P09105 142 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF806P0C7X5 589 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SLC2A1P11166 492 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SLC2A2P11168 524 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 HSD3B1P14060 373 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 FOLR2P14207 255 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 DPEP1P16444 411 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 UGT2B7P16662 529 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CYP2B6P20813 491 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 FPR1P21462 350 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 WARSP23381 471 aaKnown RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 GADD45AP24522 165 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 LCN1P31025 176 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 GKP32189 559 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 IGFALSP35858 605 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 DCTP40126 519 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 RFC3P40938 356 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 MAGEA2P43356 314 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 KIR2DL3P43628 341 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CAPZA2P47755 286 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 KCNQ1P51787 676 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 RPL7AP62424 266 aaKnown RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 RNF4P78317 190 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 DEFA6Q01524 100 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 OGDHQ02218 1023 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 RPA4Q13156 261 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 DMP1Q13316 513 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 C1DQ13901 141 aaKnown RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ERV3-1Q14264 604 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ODF1Q14990 250 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TSNQ15631 228 aaKnown RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 PTPN20Q4JDL3 420 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 KLHL22Q53GT1 634 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 NOMO2Q5JPE7 1267 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 GPRC6AQ5T6X5 926 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 MEDAGQ5VYS4 303 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SAXO2Q658L1 398 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 RAP1GAP2Q684P5 730 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TCEAL6Q6IPX3 200 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 LAIR2Q6ISS4 152 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 RGS7BPQ6MZT1 257 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 DENND1BQ6P3S1 775 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM270Q6UE05 265 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 C3P1Q6ZMU1 363 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TRILQ7L0X0 811 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 DNAJB7Q7Z6W7 309 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF605Q86T29 641 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TMC8Q8IU68 726 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 FUNDC1Q8IVP5 155 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SLC44A2Q8IWA5 706 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CNTN4Q8IWV2 1026 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SVBPQ8N300 66 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 FSTL5Q8N475 847 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 KLHL36Q8N4N3 616 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 OXR1Q8N573 874 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 FAM26EQ8N5C1 309 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF557Q8N988 423 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 BVESQ8NE79 360 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 DMBX1Q8NFW5 382 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 OR2T4Q8NH00 348 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ABHD4Q8TB40 342 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 HEXDCQ8WVB3 486 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 GTF3AQ92664 365 aaKnown RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CENPIQ92674 756 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 RHBDF1Q96CC6 855 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TCEAL4Q96EI5 215 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SIPA1Q96FS4 1042 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CPB2Q96IY4 423 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 PRMT6Q96LA8 375 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 COQ10AQ96MF6 247 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 NEDD4LQ96PU5 975 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SLC38A2Q96QD8 506 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TAAR9Q96RI9 348 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 MCCC1Q96RQ3 725 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 KCNJ15Q99712 375 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CBWD1Q9BRT8 395 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM175Q9BSA9 504 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 REG4Q9BYZ8 158 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 NKX6-2Q9C056 277 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 C11orf54Q9H0W9 315 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 MIXL1Q9H2W2 232 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 GHITMQ9H3K2 345 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 HEXA-AS1Q9H8Q6 139 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ACTR8Q9H981 624 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 MRPS30Q9NP92 439 aaKnown RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ISYNA1Q9NPH2 558 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 GSN-AS1Q9NRJ2 163 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 IMPAD1Q9NX62 359 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ERVK13-1Q9NX77 482 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 MTMR4Q9NYA4 1195 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms