RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FAM198BQ6UWH4 519 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 MTERF4Q7Z6M4 381 aaKnown RBP14.37□□□□□ -0.11
SNIP1-202ENST00000468040 GPR180Q86V85 440 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 FNDC5Q8NAU1 212 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 CT55Q8WUE5 264 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 GATA6Q92908 595 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 KIAA1143Q96AT1 154 aaPredicted RBP14.37□□□□□ -0.11
SNIP1-202ENST00000468040 TBC1D20Q96BZ9 403 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 FCRL1Q96LA6 429 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 GPR87Q9BY21 358 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 TGIF2Q9GZN2 237 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 NSRP1Q9H0G5 558 aaKnown RBP14.37□□□□□ -0.11
SNIP1-202ENST00000468040 WDR55Q9H6Y2 383 aaPredicted RBP14.37□□□□□ -0.11
SNIP1-202ENST00000468040 AKIRIN1Q9H9L7 192 aaPredicted RBP14.37□□□□□ -0.11
SNIP1-202ENST00000468040 CTSFQ9UBX1 484 aa14.37□□□□□ -0.11
SNIP1-202ENST00000468040 GOLGA8QA0A0J9YX86 632 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 BLACEA4D250 179 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 GOLGA8OA6NCC3 632 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 GMNCA6NCL1 334 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 GOLGA8NF8WBI6 632 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 ANXA4P09525 319 aaPredicted RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 TCN2P20062 427 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 EPHA3P29320 983 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 TLX1P31314 330 aaPredicted RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 BUD31P41223 144 aaPredicted RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 RPS15P62841 145 aaKnown RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 ERVK-8P63133 956 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 TNFRSF17Q02223 184 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 EMX2Q04743 252 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 SLC9B1Q4ZJI4 515 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 LCN10Q6JVE6 187 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 LARP4Q71RC2 724 aaKnown RBP eCLIP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 MED25Q71SY5 747 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 EFCAB3Q8N7B9 438 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 ZNF248Q8NDW4 579 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 CEP70Q8NHQ1 597 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 SNIP1Q8TAD8 396 aaKnown RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 STT3BQ8TCJ2 826 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 ACTRT2Q8TDY3 377 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 MIEF2Q96C03 454 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 PEX11GQ96HA9 241 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 MAPKAP1Q9BPZ7 522 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 FAIM2Q9BWQ8 316 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 EBPLQ9BY08 206 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 ASIC5Q9NY37 505 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 NOP53Q9NZM5 478 aaKnown RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 KCMF1Q9P0J7 381 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 GIMAP2Q9UG22 337 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 KCND3Q9UK17 655 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 CROTQ9UKG9 612 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 EIF3LQ9Y262 564 aaKnown RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 MRPS33Q9Y291 106 aaKnown RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 WBP11Q9Y2W2 641 aaKnown RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 POLR3HQ9Y535 204 aaPredicted RBP14.36□□□□□ -0.11
SNIP1-202ENST00000468040 ASB4Q9Y574 426 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 SCN3AQ9NY46 2000 aa14.36□□□□□ -0.11
SNIP1-202ENST00000468040 FER1L5A0AVI2 2057 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 VSTM2BA6NLU5 285 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 DNAJB6O75190 326 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 BMP10O95393 424 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 FHP07954 510 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 ZGLP1P0C6A0 271 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 NR2F6P10588 404 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 PRPS2P11908 318 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 PCSK2P16519 638 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 CPN2P22792 545 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 DLSTP36957 453 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 IDH3AP50213 366 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 HNRNPH2P55795 449 aaKnown RBP14.35□□□□□ -0.11
SNIP1-202ENST00000468040 DNASE1L3Q13609 305 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 NKG7Q16617 165 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 NXNQ6DKJ4 435 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 IKBIPQ70UQ0 350 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 SPATA19Q7Z5L4 167 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 ZC3H7AQ8IWR0 971 aaKnown RBP14.35□□□□□ -0.11
SNIP1-202ENST00000468040 FAM9CQ8IZT9 166 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 KCNE4Q8WWG9 221 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 THOC1Q96FV9 657 aaKnown RBP14.35□□□□□ -0.11
SNIP1-202ENST00000468040 CCDC28BQ9BUN5 200 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 EFHD1Q9BUP0 239 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 GPN2Q9H9Y4 310 aaPredicted RBP14.35□□□□□ -0.11
SNIP1-202ENST00000468040 WDR41Q9HAD4 459 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 TCF7L2Q9NQB0 619 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 PRDM9Q9NQV7 894 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 DCTN4Q9UJW0 460 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 ADAM21Q9UKJ8 722 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 FBXW2Q9UKT8 454 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 ATG4BQ9Y4P1 393 aa14.35□□□□□ -0.11
SNIP1-202ENST00000468040 CACNA1AO00555 2505 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 A0A0G2JND7 137 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 A0A1W2PR48 441 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 CYR61O00622 381 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 CLDN4O14493 209 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 PROM1O43490 865 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 CYC1P08574 325 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 BCKDHAP12694 445 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 SDC1P18827 310 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 PTPN4P29074 926 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 ASMTP46597 345 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 SEC24CP53992 1094 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms