RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MLF1P58340 268 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 RBPJQ06330 500 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 UAP1Q16222 522 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-207ENST00000467985 SPINK14Q6IE38 97 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 MED27Q6P2C8 311 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 CHSY3Q70JA7 882 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 LAS2Q8IYD9 372 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 CENPLQ8N0S6 344 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-207ENST00000467985 FAM98AQ8NCA5 519 aaKnown RBP17.84■□□□□ 0.45
COL7A1-207ENST00000467985 C7orf57Q8NEG2 295 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 KCTD4Q8WVF5 259 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 MRRFQ96E11 262 aaKnown RBP17.84■□□□□ 0.45
COL7A1-207ENST00000467985 F2RL3Q96RI0 385 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 FMO2Q99518 471 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 LYRM4Q9HD34 91 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 NINJ2Q9NZG7 142 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 LRFN1Q9P244 771 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 PPIEQ9UNP9 301 aaKnown RBP17.84■□□□□ 0.45
COL7A1-207ENST00000467985 ASB1Q9Y576 335 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 SPACA6W5XKT8 324 aa17.84■□□□□ 0.45
COL7A1-207ENST00000467985 A0A096LPK6 155 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 A8MUA0 341 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 CYR61O00622 381 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 CTNSO60931 367 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 NEURL1O76050 574 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 MYO1DO94832 1006 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 UNC5CO95185 931 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 KLHL2O95198 593 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 SP1P08047 785 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 GFAPP14136 432 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 MST1P26927 711 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 CERS1P27544 350 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 TPP2P29144 1249 aaPredicted RBP17.83■□□□□ 0.44
COL7A1-207ENST00000467985 TYK2P29597 1187 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 TRHRP34981 398 aaPredicted RBP17.83■□□□□ 0.44
COL7A1-207ENST00000467985 CYB561P49447 251 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 ALDH18A1P54886 795 aaKnown RBP17.83■□□□□ 0.44
COL7A1-207ENST00000467985 KCNK10P57789 538 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 BMPR2Q13873 1038 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 NAA30Q147X3 362 aaPredicted RBP17.83■□□□□ 0.44
COL7A1-207ENST00000467985 ERCC6LQ2NKX8 1250 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 ADNP2Q6IQ32 1131 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 SLC25A25Q6KCM7 469 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 METTL2BQ6P1Q9 378 aaKnown RBP17.83■□□□□ 0.44
COL7A1-207ENST00000467985 FAM47BQ8NA70 645 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 APCDD1LQ8NCL9 501 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 ZNF473Q8WTR7 871 aaKnown RBP17.83■□□□□ 0.44
COL7A1-207ENST00000467985 RELTQ969Z4 430 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 CMTM7Q96FZ5 175 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 VMP1Q96GC9 406 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 MS4A8Q9BY19 250 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 FUT8Q9BYC5 575 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 TRIM45Q9H8W5 580 aaPredicted RBP17.83■□□□□ 0.44
COL7A1-207ENST00000467985 ADAP2Q9NPF8 381 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 PRDM7Q9NQW5 492 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 KLHL1Q9NR64 748 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 PNO1Q9NRX1 252 aaKnown RBP17.83■□□□□ 0.44
COL7A1-207ENST00000467985 NFU1Q9UMS0 254 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 ANGPTL3Q9Y5C1 460 aa17.83■□□□□ 0.44
COL7A1-207ENST00000467985 LRBAP50851 2863 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 HMX2A2RU54 273 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 ASPDHA6ND91 283 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 SLC25A12O75746 678 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 CLDN1O95832 211 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 PCNAP12004 261 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 MTHFD2P13995 350 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 PIK3CGP48736 1102 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 HLCSP50747 726 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 IRF9Q00978 393 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 SETDB1Q15047 1291 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 ELAVL1Q15717 326 aaKnown RBP17.82■□□□□ 0.44
COL7A1-207ENST00000467985 AP5B1Q2VPB7 878 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 KRTCAP3Q53RY4 240 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 GRHL2Q6ISB3 625 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 TAOK1Q7L7X3 1001 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 TMEM132CQ8N3T6 1108 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 OR7G3Q8NG95 312 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 TMEM125Q96AQ2 219 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 CCDC77Q9BR77 488 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 CENPKQ9BS16 269 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 ANKZF1Q9H8Y5 726 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 TSC22D4Q9Y3Q8 395 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 TNPO3Q9Y5L0 923 aaKnown RBP17.82■□□□□ 0.44
COL7A1-207ENST00000467985 IKBKGQ9Y6K9 419 aa17.82■□□□□ 0.44
COL7A1-207ENST00000467985 TRBV11-1A0A0K0K1C0 115 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 SCELO95171 688 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 ALDOAP04075 364 aaKnown RBP17.81■□□□□ 0.44
COL7A1-207ENST00000467985 INHBAP08476 426 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 ATP5A1P25705 553 aaKnown RBP17.81■□□□□ 0.44
COL7A1-207ENST00000467985 PIK3CBP42338 1070 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 HNRNPFP52597 415 aaKnown RBP17.81■□□□□ 0.44
COL7A1-207ENST00000467985 PMP22Q01453 160 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 ALDH6A1Q02252 535 aaKnown RBP17.81■□□□□ 0.44
COL7A1-207ENST00000467985 STX4Q12846 297 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 PFKFB4Q16877 469 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 C1QL3Q5VWW1 255 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 LIPJQ5W064 366 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 UBE3DQ7Z6J8 389 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 FJX1Q86VR8 437 aa17.81■□□□□ 0.44
COL7A1-207ENST00000467985 TEX9Q8N6V9 391 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms