RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 PDK4Q16654 411 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 EPC2Q52LR7 807 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 TMEM41BQ5BJD5 291 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 KCTD11Q693B1 232 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 TXNRD3NBQ6F5E7 133 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 CLEC2AQ6UVW9 174 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 CCDC80Q76M96 950 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 PIGWQ7Z7B1 504 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 FBXO39Q8N4B4 442 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 GBP7Q8N8V2 638 aaPredicted RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 NECAB1Q8N987 351 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 CLEC1AQ8NC01 280 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 ADAD2Q8NCV1 583 aaKnown RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 OR56B1Q8NGI3 324 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 U2AF1L4Q8WU68 220 aaKnown RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 DNAJA4Q8WW22 397 aaPredicted RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 NSMAFQ92636 917 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 FCGR1BQ92637 280 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 RAD54LQ92698 747 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 SEMA4DQ92854 862 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 RASD2Q96D21 266 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 SENP5Q96HI0 755 aaPredicted RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 LRR1Q96L50 414 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 PRICKLE1Q96MT3 831 aaPredicted RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 NECTIN4Q96NY8 510 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 MS4A10Q96PG2 267 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 PANX3Q96QZ0 392 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 ZNF607Q96SK3 696 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 ASCL2Q99929 193 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 SPAG8Q99932 426 aaPredicted RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 JPH2Q9BR39 696 aaPredicted RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 RIOK1Q9BRS2 568 aaKnown RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 ZNF577Q9BSK1 485 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 UBQLN3Q9H347 655 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 VAT1LQ9HCJ6 419 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 PNPLA3Q9NST1 481 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 ETNK2Q9NVF9 386 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 QPCTLQ9NXS2 382 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 PTTG2Q9NZH5 202 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 LARSQ9P2J5 1176 aaKnown RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 KCNK6Q9Y257 313 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 GMEB1Q9Y692 573 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 GREB1LQ9C091 1923 aaPredicted RBP3.42□□□□□ -1.86
VPS50-209ENST00000467326 MAP3K19Q56UN5 1328 aa3.42□□□□□ -1.86
VPS50-209ENST00000467326 NPC1L1Q9UHC9 1359 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 TEX13DA0A0J9YY54 714 aaPredicted RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 A0A0U1RQS6 177 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ZNF716A6NP11 495 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 H3BMM5 538 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 CTDSPLO15194 276 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 NDUFS4O43181 175 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 LRRTM2O43300 516 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 B4GALT2O60909 372 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 TRIM3O75382 744 aaPredicted RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 TOM1L1O75674 476 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 FGFR1OPO95684 399 aaKnown RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 KRT14P02533 472 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 CXCL10P02778 98 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 H1F0P07305 194 aaKnown RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 PLA2G4BP0C869 781 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ZNF735P0CB33 412 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 RNF224P0DH78 156 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 MYL6BP14649 208 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 FUT1P19526 365 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ATP6V1C1P21283 382 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 PTPN6P29350 595 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 SLC6A6P31641 620 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 NF2P35240 595 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 THOP1P52888 689 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 AP3M2P53677 418 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 AIF1P55008 147 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 MAP3K7CLP57077 242 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 PTENP60484 403 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 UBE2HP62256 183 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 SNRPEP62304 92 aaKnown RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 GNB1P62873 340 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 PPP2R2BQ00005 443 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 TNK1Q13470 666 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 CUL1Q13616 776 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 IL18Q14116 193 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 PDK3Q15120 406 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 FCN2Q15485 313 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 STXBP2Q15833 593 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 SSX2Q16385 188 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 CARTPTQ16568 116 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 FAM174BQ3ZCQ3 159 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 USH1GQ495M9 461 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 SPDYCQ5MJ68 293 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ARMC12Q5T9G4 340 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 FAM53AQ6NSI3 398 aaPredicted RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 FBXL22Q6P050 247 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 CENPQQ7L2Z9 268 aaPredicted RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 EFL1Q7Z2Z2 1120 aaKnown RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 ISCA2Q86U28 154 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ADIPOR2Q86V24 386 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 TMEM173Q86WV6 379 aaPredicted RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 NUDT13Q86X67 352 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 LRRC49Q8IUZ0 686 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ZDHHC21Q8IVQ6 265 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms