RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 MT-ND2P03891 347 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 VTNP04004 478 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 YES1P07947 543 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 GP1BBP13224 206 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 P4HA1P13674 534 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 VCLP18206 1134 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 SERPINH1P50454 418 aaKnown RBP1.72□□□□□ -2.13
CCDC93-205ENST00000466171 DCDC1P59894 354 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 UBXN1Q04323 297 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 ACTN3Q08043 901 aaPredicted RBP1.72□□□□□ -2.13
CCDC93-205ENST00000466171 AP1B1Q10567 949 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 TEFQ10587 303 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 RPA4Q13156 261 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 CBX3Q13185 183 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 CDH18Q13634 790 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 MORF4L2Q15014 288 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 RPS6KA1Q15418 735 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 MAPK11Q15759 364 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 ACKR1Q16570 336 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 SGCBQ16585 318 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 DUSP5Q16690 384 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 LRRC37A5PQ49AS3 106 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 ARMCX4Q5H9R4 360 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 FRRS1Q6ZNA5 592 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 FCRLAQ7L513 359 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 GPR141Q7Z602 305 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 ASPGQ86U10 573 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 TMEM126BQ8IUX1 230 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 CCDC60Q8IWA6 550 aaPredicted RBP1.72□□□□□ -2.13
CCDC93-205ENST00000466171 ZC3H3Q8IXZ2 948 aaKnown RBP1.72□□□□□ -2.13
CCDC93-205ENST00000466171 KLHDC8AQ8IYD2 350 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 GPC2Q8N158 579 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 SFRP1Q8N474 314 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 NAT8LQ8N9F0 302 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 LPCAT1Q8NF37 534 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 NEK11Q8NG66 645 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 SEPT8Q92599 483 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 SERAC1Q96JX3 654 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 B3GALT6Q96L58 329 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 C2orf48Q96LS8 159 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 PANX3Q96QZ0 392 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 MRPL9Q9BYD2 267 aaKnown RBP1.72□□□□□ -2.13
CCDC93-205ENST00000466171 ACPTQ9BZG2 426 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 TUBB1Q9H4B7 451 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 RNPEPL1Q9HAU8 725 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 C3orf14Q9HBI5 128 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 SPG21Q9NZD8 308 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 AKAP7Q9P0M2 348 aaPredicted RBP1.72□□□□□ -2.13
CCDC93-205ENST00000466171 POLKQ9UBT6 870 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 IL36AQ9UHA7 158 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 LEF1Q9UJU2 399 aaPredicted RBP1.72□□□□□ -2.13
CCDC93-205ENST00000466171 PLCL2Q9UPR0 1127 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 VSIG4Q9Y279 399 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 TMED7Q9Y3B3 224 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 HCFC1P51610 2035 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 SPATA31D1Q6ZQQ2 1576 aa1.72□□□□□ -2.13
CCDC93-205ENST00000466171 ABCC9O60706 1549 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 PFASO15067 1338 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 A0A087WZ39 114 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 A0A1W2PR80 420 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 SYCE3A1L190 88 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 C5orf51A6NDU8 294 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 ZNF732B4DXR9 585 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 C2CD4DB7Z1M9 353 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 M0R296 226 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 DDX39AO00148 427 aaKnown RBP1.71□□□□□ -2.14
CCDC93-205ENST00000466171 CACNB4O00305 520 aaPredicted RBP1.71□□□□□ -2.14
CCDC93-205ENST00000466171 MAGEB2O15479 319 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 GALR3O60755 368 aaPredicted RBP1.71□□□□□ -2.14
CCDC93-205ENST00000466171 SAP30O75446 220 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 GRAP2O75791 330 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 LETM1O95202 739 aaPredicted RBP1.71□□□□□ -2.14
CCDC93-205ENST00000466171 GAS8O95995 478 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 CD59P13987 128 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 HLA-DPA1P20036 260 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 KLK2P20151 261 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 AADACP22760 399 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 CTNNA2P26232 953 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 GJB2P29033 226 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 SRD5A2P31213 254 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 SLC1A3P43003 542 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 IER3P46695 156 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 KHKP50053 298 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 ADARP55265 1226 aaKnown RBP1.71□□□□□ -2.14
CCDC93-205ENST00000466171 KIAA1024LP59773 190 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 CSNK2BP67870 215 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 GALK2Q01415 458 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 GFPT1Q06210 699 aaPredicted RBP1.71□□□□□ -2.14
CCDC93-205ENST00000466171 SLC34A1Q06495 639 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 NPRL3Q12980 569 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 EFTUD2Q15029 972 aaKnown RBP eCLIP1.71□□□□□ -2.143e-6■■■□□ 18.3
CCDC93-205ENST00000466171 C3AR1Q16581 482 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 C2orf76Q3KRA6 126 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 FUT11Q495W5 492 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 AARDQ4LEZ3 155 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 ZNF789Q5FWF6 425 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 CES4AQ5XG92 561 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 ZNF770Q6IQ21 691 aaPredicted RBP1.71□□□□□ -2.14
CCDC93-205ENST00000466171 KLHL10Q6JEL2 608 aa1.71□□□□□ -2.14
CCDC93-205ENST00000466171 SLC27A4Q6P1M0 643 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms