RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 TGFBR1P36897 503 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 ALDH9A1P49189 494 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 VBP1P61758 197 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 FADDQ13158 208 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 RPS26P11Q5JNZ5 115 aaPredicted RBP17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 TRIM40Q6P9F5 258 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 LRRTM4Q86VH4 590 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 C17orf64Q86WR6 236 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 PLD3Q8IV08 490 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 CCDC103Q8IW40 242 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 OR5K2Q8NHB8 316 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 MIPOL1Q8TD10 442 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 YIPF6Q96EC8 236 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 RHCGQ9UBD6 479 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 SERGEFQ9UGK8 458 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 SNX11Q9Y5W9 270 aa17.83■□□□□ 0.45
TSPAN4-210ENST00000464987 C1QTNF3-AMACRE9PGA6 284 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 M0R129 80 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 PCDH17O14917 1159 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 ADAMDEC1O15204 470 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 MID1O15344 667 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 GABARAPO95166 117 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 FUCA1P04066 466 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 CCR3P51677 355 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 PCBP3P57721 371 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 DUSP7Q16829 419 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 BTLAQ7Z6A9 289 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 KRT78Q8N1N4 520 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 AMER3Q8N944 861 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 TM4SF18Q96CE8 201 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 EPS8L2Q9H6S3 715 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 PRDM8Q9NQV8 689 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 RAB23Q9ULC3 237 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 SLC6A14Q9UN76 642 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 WDR37Q9Y2I8 494 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 RWDD3Q9Y3V2 267 aa17.83■□□□□ 0.44
TSPAN4-210ENST00000464987 A0A0G2JN53 185 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 A0A1W2PPV9 198 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 ANKDD1BA6NHY2 528 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 PPM1DO15297 605 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 DNAJB5O75953 348 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 PCDH8O95206 1070 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 ARAFP10398 606 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 ERGP11308 486 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 FCARP24071 287 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 BSGP35613 385 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 RPL3P39023 403 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 PHEXP78562 749 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 RBBP4Q09028 425 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 CYP2A13Q16696 494 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 CRB2Q5IJ48 1285 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 SYT6Q5T7P8 510 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 DEPDC1Q5TB30 811 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 KHDRBS2Q5VWX1 349 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 METRNLQ641Q3 311 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 TNFAIP8L2Q6P589 184 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 ADAMTSL4Q6UY14 1074 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 CCDC80Q76M96 950 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 LGI4Q8N135 537 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 KLK6Q92876 244 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 UBE2E3Q969T4 207 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 SIGLEC11Q96RL6 698 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 MS4A8Q9BY19 250 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 HDAC8Q9BY41 377 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 LHX9Q9NQ69 397 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 TBC1D23Q9NUY8 699 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 PNMA8BQ9ULN7 279 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 MDC1Q14676 2089 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 B4GALT2O60909 372 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 C21orf33P30042 268 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 OPRL1P41146 370 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 SLC19A1P41440 591 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 CLCNKAP51800 687 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 VITQ6UXI7 678 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 Q6ZNX1 250 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 HORMAD2Q8N7B1 307 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 LINC01555Q8NAE3 123 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 PHOSPHO2Q8TCD6 241 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 PROX1Q92786 737 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 RPL3LQ92901 407 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 MTERF3Q96E29 417 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 THAP10Q9P2Z0 257 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 TSC22D4Q9Y3Q8 395 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 AP1M2Q9Y6Q5 423 aa17.82■□□□□ 0.44
TSPAN4-210ENST00000464987 USP34Q70CQ2 3546 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 FAM227AF5H4B4 570 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 ZSCAN9O15535 394 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 GJA4P35212 333 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 MAPK12P53778 367 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 NCS1P62166 190 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 GPM6BQ13491 265 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 MICAQ29983 383 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 AGBL4Q5VU57 503 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 SLC44A2Q8IWA5 706 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 FAM20CQ8IXL6 584 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 LZICQ8WZA0 190 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 THSD1Q9NS62 852 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 ACER3Q9NUN7 267 aa17.81■□□□□ 0.44
TSPAN4-210ENST00000464987 PCDHGA2Q9Y5H1 932 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms