RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 PDCL3Q9H2J4 239 aa0.07□□□□□ -2.4
TMEM56-204ENST00000463375 EHD1Q9H4M9 534 aa0.07□□□□□ -2.4
TMEM56-204ENST00000463375 WASH6PQ9NQA3 447 aa0.07□□□□□ -2.4
TMEM56-204ENST00000463375 CLIC5Q9NZA1 410 aa0.07□□□□□ -2.4
TMEM56-204ENST00000463375 SLC13A4Q9UKG4 626 aa0.07□□□□□ -2.4
TMEM56-204ENST00000463375 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
TMEM56-204ENST00000463375 C17orf105B2RV13 164 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 DEDDO75618 318 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 C6orf47O95873 294 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 CD4P01730 458 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 IGFBP3P17936 291 aaPredicted RBP0.06□□□□□ -2.4
TMEM56-204ENST00000463375 RPS10P46783 165 aaKnown RBP0.06□□□□□ -2.4
TMEM56-204ENST00000463375 CCR9P51686 369 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 CLDN17P56750 224 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 RBBP4Q09028 425 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 NONOQ15233 471 aaKnown RBP eCLIP0.06□□□□□ -2.4
TMEM56-204ENST00000463375 RFTN2Q52LD8 501 aaPredicted RBP0.06□□□□□ -2.4
TMEM56-204ENST00000463375 TMEM211Q6ICI0 200 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 DHRS11Q6UWP2 260 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 CHST9Q7L1S5 443 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 DET1Q7L5Y6 550 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 RYBPQ8N488 228 aaPredicted RBP0.06□□□□□ -2.4
TMEM56-204ENST00000463375 SAMD3Q8N6K7 520 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 ZNF709Q8N972 641 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 CLEC1AQ8NC01 280 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 ZNF671Q8TAW3 534 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 LIPHQ8WWY8 451 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 ATL1Q8WXF7 558 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 COL21A1Q96P44 957 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 SPIN2AQ99865 258 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 SPIN2BQ9BPZ2 258 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 SLC2A11Q9BYW1 496 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 OPA3Q9H6K4 179 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 RNF121Q9H920 327 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 CDH20Q9HBT6 801 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 SEC63Q9UGP8 760 aaKnown RBP0.06□□□□□ -2.4
TMEM56-204ENST00000463375 MLXQ9UH92 298 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 SAMHD1Q9Y3Z3 626 aaKnown RBP0.06□□□□□ -2.4
TMEM56-204ENST00000463375 FLVCR1Q9Y5Y0 555 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 COLEC10Q9Y6Z7 277 aa0.06□□□□□ -2.4
TMEM56-204ENST00000463375 CFAP65Q6ZU64 1925 aaKnown RBP0.06□□□□□ -2.4
TMEM56-204ENST00000463375 MYO1GB0I1T2 1018 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 ANHXE9PGG2 379 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 AP3D1O14617 1153 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 RPS6KA5O75582 802 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 CSN3P07498 182 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 SBK2P0C263 348 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 CCDC159P0C7I6 412 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 HSPA1AP0DMV8 641 aaKnown RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 HSPA1BP0DMV9 641 aaKnown RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 SAGP10523 405 aaPredicted RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 FOSL2P15408 326 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 GOT1P17174 413 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 CTNNA2P26232 953 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 DUTP33316 252 aaKnown RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 PPARGP37231 505 aaPredicted RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 XCR1P46094 333 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 TUBP50607 506 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 CRISP1P54107 249 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 KRTAP12-1P59990 96 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 CRYMQ14894 314 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 BRD3Q15059 726 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 RPS6KA1Q15418 735 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 SBK1Q52WX2 424 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 C5orf47Q569G3 176 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 TSPO2Q5TGU0 170 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 NOL8Q76FK4 1167 aaKnown RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 TRMT11Q7Z4G4 463 aaKnown RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 GPR65Q8IYL9 337 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 ARRDC1Q8N5I2 433 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 PDILTQ8N807 584 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 RRP36Q96EU6 259 aaKnown RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 RBM41Q96IZ5 413 aaKnown RBP0.05□□□□□ -2.4
TMEM56-204ENST00000463375 SH3GLB2Q9NR46 395 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 PSD3Q9NYI0 1048 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 SPG21Q9NZD8 308 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 CACNG2Q9Y698 323 aa0.05□□□□□ -2.4
TMEM56-204ENST00000463375 SORL1Q92673 2214 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 ARPC4-TTLL3A0A0A6YYG9 625 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 SLC15A5A6NIM6 579 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 PTGESO14684 152 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 MMP23AO75900 390 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 TMEM63AO94886 807 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 FGF19O95750 216 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 CLTBP09497 229 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 XBP1P17861 261 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 CD22P20273 847 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 IL2RGP31785 369 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 SLC26A2P50443 739 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 MNAT1P51948 309 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 MFAP4P55083 255 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 UBASH3AP57075 661 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 CACNG1Q06432 222 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 HSPB3Q12988 150 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 SLC10A1Q14973 349 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 KRTAP21-1Q3LI58 79 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 ZNF528Q3MIS6 628 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 SNX30Q5VWJ9 437 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 MOB1BQ7L9L4 216 aa0.04□□□□□ -2.4
TMEM56-204ENST00000463375 PXKQ7Z7A4 578 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms