RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 DUSP18Q8NEJ0 188 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 OR6K2Q8NGY2 324 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 OR52P1PQ8NH57 321 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 NFKBIDQ8NI38 313 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 SKA2Q8WVK7 121 aaPredicted RBP9.87□□□□□ -0.83
CLIP4-208ENST00000456385 MTERF3Q96E29 417 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 TM9SF2Q99805 663 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 MAPKAP1Q9BPZ7 522 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 ACAT2Q9BWD1 397 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 MND1Q9BWT6 205 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 FBXO44Q9H4M3 255 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 NUP50Q9UKX7 468 aa9.87□□□□□ -0.83
CLIP4-208ENST00000456385 TRBV4-1A0A0J9YWV2 114 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 H3BNC9 293 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 TRIM77I1YAP6 450 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 SLC22A5O76082 557 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 APOL3O95236 402 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 TNNI3P19429 210 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 AOAHP28039 575 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 XCR1P46094 333 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 LIMS1P48059 325 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 SOX9P48436 509 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 SLC9A3P48764 834 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 ALDH9A1P49189 494 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 AGFG1P52594 562 aaKnown RBP9.86□□□□□ -0.83
CLIP4-208ENST00000456385 MVDP53602 400 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 PER3P56645 1201 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 CLDN20P56880 219 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 TAGLNQ01995 201 aaKnown RBP9.86□□□□□ -0.83
CLIP4-208ENST00000456385 SEMG2Q02383 582 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 UBE3AQ05086 875 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 ZNF91Q05481 1191 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 MGAT3Q09327 533 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 MRPL28Q13084 256 aaKnown RBP9.86□□□□□ -0.83
CLIP4-208ENST00000456385 ZNF267Q14586 743 aaPredicted RBP9.86□□□□□ -0.83
CLIP4-208ENST00000456385 CCDC85BQ15834 202 aaPredicted RBP9.86□□□□□ -0.83
CLIP4-208ENST00000456385 ATXN7L2Q5T6C5 722 aaPredicted RBP9.86□□□□□ -0.83
CLIP4-208ENST00000456385 CERS6Q6ZMG9 384 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 TLK2Q86UE8 772 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 TRIM69Q86WT6 500 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 CLDN22Q8N7P3 220 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 SLC37A3Q8NCC5 494 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 OR4K1Q8NGD4 311 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 NPLOC4Q8TAT6 608 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 MSANTD3Q96H12 275 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 SUSD3Q96L08 255 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 PIP5K1AQ99755 562 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 ATG10Q9H0Y0 220 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 PPP1R3EQ9H7J1 279 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 RDH14Q9HBH5 336 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 FZD3Q9NPG1 666 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 IL26Q9NPH9 171 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 ACSL6Q9UKU0 697 aa9.86□□□□□ -0.83
CLIP4-208ENST00000456385 TEX51A0A1B0GUA7 166 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 FADS2P1A8MWK0 482 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ISM1B1AKI9 464 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 GTPBP1O00178 669 aaKnown RBP9.85□□□□□ -0.83
CLIP4-208ENST00000456385 PDPK1O15530 556 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 PROM1O43490 865 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 MPZL2O60487 215 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 B4GALT3O60512 393 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 LGI1O95970 557 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 CD160O95971 181 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 NAGAP17050 411 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 CTRB1P17538 263 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ATF4P18848 351 aaPredicted RBP9.85□□□□□ -0.83
CLIP4-208ENST00000456385 CD22P20273 847 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ETV5P41161 510 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ETV1P50549 477 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 RPS25P62851 125 aaKnown RBP9.85□□□□□ -0.83
CLIP4-208ENST00000456385 MLLT11Q13015 90 aaPredicted RBP9.85□□□□□ -0.83
CLIP4-208ENST00000456385 SCARB2Q14108 478 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 IL18Q14116 193 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 LRRC32Q14392 662 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 POU4F3Q15319 338 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 TEAD4Q15561 434 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 CPTPQ5TA50 214 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 CTRB2Q6GPI1 263 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ANKRD54Q6NXT1 300 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 TEX261Q6UWH6 196 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 HSDL2Q6YN16 418 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ANKS3Q6ZW76 656 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ZNF680Q8NEM1 530 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 OR4A15Q8NGL6 344 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 DNAJA4Q8WW22 397 aaPredicted RBP9.85□□□□□ -0.83
CLIP4-208ENST00000456385 C1GALT1C1Q96EU7 318 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ZC3HAV1LQ96H79 300 aaKnown RBP9.85□□□□□ -0.83
CLIP4-208ENST00000456385 PKP4Q99569 1192 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 MARVELD1Q9BSK0 173 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 TSSK6Q9BXA6 273 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ARHGAP39Q9C0H5 1083 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ANKRA2Q9H9E1 313 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 SPIN1Q9Y657 262 aaPredicted RBP9.85□□□□□ -0.83
CLIP4-208ENST00000456385 U3KQ87 197 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 ALPK3Q96L96 1907 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 C2orf78A6NCI8 922 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 SNTNA6NMZ2 147 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 H3BN98 237 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 PITPNM1O00562 1244 aa9.85□□□□□ -0.83
CLIP4-208ENST00000456385 SCAMP2O15127 329 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms